Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1170 111 1e-19 seq8132 96.9 2e-15 >seq1170 Length=16159 Score = 111 bits (122), Expect = 1e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 ||||||||||| | || ||||||||||| | || ||||| || |||||||| ||||| Sbjct 6852 GACAAAGAAGGAATTCCTCCAGATCAACAAAGGTTGATATTCGCGGGCAAACAGTTGGAA 6793 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | || ||| | ||||||||||| |||||||| || || |||||||||||| || Sbjct 6792 GATGGGCGTACTCTGTCGGATTACAACATTCAAAAAGAATCAACTTTACATTTAGTTCTA 6733 Query 23824 AGGTTGCGAGGAGG 23837 ||||| || || || Sbjct 6732 AGGTTACGCGGCGG 6719 >seq8132 Length=838 Score = 96.9 bits (106), Expect = 2e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 23705 ACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAG 23764 ||||||||||| | ||||| |||||||||||| | || |||| || |||||| |||| | Sbjct 4 ACAAAGAAGGTATTCCGCCCGATCAACAGCGTGTGATCTTTGATGGGAAACAATTGGAGG 63 Query 23765 ACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAA 23824 | | |||||| ||| |||||| | || || |||| ||| |||||||||| ||| Sbjct 64 ATGGACGCACATTACTTGATTACCAAATCCAGCAAGAAGATACAGTACATTTAGTGTTAC 123 Query 23825 GGTTGCGAGGAGG 23837 | ||| |||| || Sbjct 124 GTTTGAGAGGTGG 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337972438062668