Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq1170 104 2e-17 >seq1170 Length=16159 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 101011 GCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGC 101070 |||||| || || |||| || | || |||||||||||||||||||| |||||||| | Sbjct 6718 GCCGCCGCGTAACCTTAGAACTAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCCGA 6777 Query 101071 CATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGG 101130 || ||| ||||||||| ||||||||||| |||| | ||||||||| ||| || Sbjct 6778 CAGAGTACGCCCATCTTCCAACTGTTTGCCCGCGAATATCAACCTTTGTTGATCTGGAGG 6837 Query 101131 CACGCCTTCTTTGTC 101145 | ||||||||||| Sbjct 6838 AATTCCTTCTTTGTC 6852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409615760483439