Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG41- 1_20[genbank_20GCA_5F900128575.1_202016-12-02] 9,021 sequences; 30,044,774 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1170 86.0 1e-11 >seq1170 Length=16159 Score = 86.0 bits (94), Expect = 1e-11 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 151890 CTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCA 151949 || || || | ||| | ||| || |||||||| ||||||||||| | | ||| | |||| Sbjct 6731 CTTAGAACTAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAGAGTACGCCCA 6790 Query 151950 TCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||||| | ||| || ||||| || | ||| || || || | | |||||||| || Sbjct 6791 TCTTCCAACTGTTTGCCCGCGAATATCAACCTTTGTTGATCTGGAGGAATTCCTTCTTTG 6850 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCT-ACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||||||| ||||||| ||| || | |||| ||| || || | |||| || Sbjct 6851 TCTTGAATTGCACGTTTGAC-GTCACTAATACTGTACGAAAATTCAACATATAGAGGTAT 6909 Query 152069 AGTTTTGCCCGTGAGAGTCTTCAC 152092 ||||| || || | |||||| || Sbjct 6910 GGTTTTTCCAGTCAAAGTCTTGAC 6933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153687439589091