Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thalassiosira_20oceanica_20[genbank_20GCA_5F000296195.2_202012-07- 25] 50,892 sequences; 92,185,637 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq44205 113 4e-20 >seq44205 Length=1572 Score = 113 bits (124), Expect = 4e-20 Identities = 168/233 (72%), Gaps = 13/233 (6%) Strand=Plus/Plus Query 94195 CCGCACGGTCAGCGTCGT-GTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCTCCAGGC 94253 ||| || ||||| | ||| |||||| |||||||| || | | |||||| ||||||| Sbjct 836 CCGGACCGTCAG-GACGTTGTTCAGGAGCAGCACGCCCTGCCTCGCCCACCGCTCCAGGT 894 Query 94254 AGCCGTGGGCGGGCGCGGGCAGCG---TCGGGTACGTCGCC----CGGAC---CGCCGCG 94303 ||||||||||||||| | || || || ||| | || | ||| | || | Sbjct 895 TGCCGTGGGCGGGCGCCCTCC-CGAACTCCGGCACGCCCCCGTCGCTGACGAGCTCCTTG 953 Query 94304 AAGATGTTGGCCAGGCTCGGGGGGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCCCG 94363 | | ||| |||||||||||||| | || || || | |||||||||| ||||||| Sbjct 954 TACACGTTCCTCAGGCTCGGGGGGACCTTGACGCCCCGGGGCACGCTGAAGGACAGCCCG 1013 Query 94364 TGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGAC 94416 ||| |||| |||||| |||||| || ||||| |||| |||||| ||| |||| Sbjct 1014 TGGCCCTGTCCCGGCTGGTGGTAGGGATCCTGCCCGACGATGACGACCCTGAC 1066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458655240738720