Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thalassiosira_20oceanica_20[genbank_20GCA_5F000296195.2_202012-07- 25] 50,892 sequences; 92,185,637 total letters Query= NC_008720.1 Length=70153 Score E Sequences producing significant alignments: (Bits) Value seq50892 91.5 7e-14 seq43102 91.5 7e-14 seq19801 91.5 7e-14 >seq50892 Length=141790 Score = 91.5 bits (100), Expect = 7e-14 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 33053 ACAGGATATAGCTCAGTTTGGTAGAGCGTCTGCTTTGGGAGCAGAATGTCGTAGGTTCGA 33112 || ||||||||||||||||||||||| ||||||||||||||| || ||||||||| | Sbjct 70461 ACGGGATATAGCTCAGTTTGGTAGAGTACCTGCTTTGGGAGCAGGGTGCCGTAGGTTCAA 70402 Query 33113 ATCCTGCTATCCTGA 33127 ||||| |||||| || Sbjct 70401 ATCCTACTATCCCGA 70387 Score = 91.5 bits (100), Expect = 7e-14 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 33053 ACAGGATATAGCTCAGTTTGGTAGAGCGTCTGCTTTGGGAGCAGAATGTCGTAGGTTCGA 33112 || ||||||||||||||||||||||| ||||||||||||||| || ||||||||| | Sbjct 141628 ACGGGATATAGCTCAGTTTGGTAGAGTACCTGCTTTGGGAGCAGGGTGCCGTAGGTTCAA 141687 Query 33113 ATCCTGCTATCCTGA 33127 ||||| |||||| || Sbjct 141688 ATCCTACTATCCCGA 141702 >seq43102 Length=56976 Score = 91.5 bits (100), Expect = 7e-14 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 33053 ACAGGATATAGCTCAGTTTGGTAGAGCGTCTGCTTTGGGAGCAGAATGTCGTAGGTTCGA 33112 || ||||||||||||||||||||||| ||||||||||||||| || ||||||||| | Sbjct 11172 ACGGGATATAGCTCAGTTTGGTAGAGTACCTGCTTTGGGAGCAGGGTGCCGTAGGTTCAA 11113 Query 33113 ATCCTGCTATCCTGA 33127 ||||| |||||| || Sbjct 11112 ATCCTACTATCCCGA 11098 >seq19801 Length=7507 Score = 91.5 bits (100), Expect = 7e-14 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 33053 ACAGGATATAGCTCAGTTTGGTAGAGCGTCTGCTTTGGGAGCAGAATGTCGTAGGTTCGA 33112 || ||||||||||||||||||||||| ||||||||||||||| || ||||||||| | Sbjct 235 ACGGGATATAGCTCAGTTTGGTAGAGTACCTGCTTTGGGAGCAGGGTGCCGTAGGTTCAA 294 Query 33113 ATCCTGCTATCCTGA 33127 ||||| |||||| || Sbjct 295 ATCCTACTATCCCGA 309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 224225638574168