Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thalassiosira_20oceanica_20[genbank_20GCA_5F000296195.2_202012-07- 25] 50,892 sequences; 92,185,637 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq4235 185 2e-41 seq18597 158 2e-33 seq9453 127 4e-24 seq46587 123 5e-23 seq33104 122 2e-22 seq45459 118 2e-21 seq4998 118 2e-21 seq20946 109 1e-18 seq47501 96.9 6e-15 seq2068 84.2 4e-11 >seq4235 Length=7148 Score = 185 bits (204), Expect = 2e-41 Identities = 321/465 (69%), Gaps = 4/465 (1%) Strand=Plus/Plus Query 268211 CCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACATTGCTTCG 268270 || || || | |||| |||| || || || | || ||||| ||||||| | | Sbjct 5359 CCTGTGGCCAGCACATAGTCATCAGGAACATCATGTTGAAGCATCATCCACATCCCCTTC 5418 Query 268271 ACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCAT 268330 || ||||| ||||| || |||||||| ||||| ||||| ||||| || || ||||| | Sbjct 5419 ACGTAGTCGCGCGCGTGTCCCCAATCACGCTTGGCGTCTATGTTTCCAAGATACAGGGTT 5478 Query 268331 TTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGA--GTGATTTTTCGGGTCACGAACG 268388 |||| ||| | | | ||||| ||| |||| || || || || || ||||| | Sbjct 5479 TTCTCAAGGCCCTGGCTGATACGTGC--GACAGCGATGGTAATCTTACGCGTGACGAAAG 5536 Query 268389 TCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCAT 268448 | | ||||| ||||| |||||||||||| ||||| ||||| | | ||| || | Sbjct 5537 TTGCTCCACGGCGAGGGGACTCGTGGTTGAAAAGGATTCCGTTCGTCAAGTGCATTCCGT 5596 Query 268449 ATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAG 268508 | |||||||| |||||||| | ||||| | ||| || |||||| || |||||||| | Sbjct 5597 AAGCCTCACGATAGTTCACAAGGATCCAGAAGGCATACTGCTTTGCCACAGCGTACGGGG 5656 Query 268509 AACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCT 268568 |||| || | ||| ||||| || ||||||| ||| |||| || || | | || Sbjct 5657 AACGGGGGTAGAAAGGCGTGGTCTCAGACTGAGGGACCTCTTGGACCTTTCCGTACAACT 5716 Query 268569 CGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTGCCT 268628 | ||||||||||| |||||||| | ||| || || || || || ||||| | Sbjct 5717 CAGAGGTCGATGCCTGGTAGAATCGACAAGCTTTCTCAAGTCCACAAGCACGAATTGCAT 5776 Query 268629 CGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACT 268673 | |||| |||||| ||| | ||||| ||| || || |||| Sbjct 5777 CCAGCATACGAAGTACTCCGACACCATCGCAGTCAGCGGTGTACT 5821 >seq18597 Length=5183 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCG 68291 ||||| || || || || | |||||||| || || ||||| || |||||||| || || Sbjct 2847 TTTCCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCC 2906 Query 68292 GAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGT 68351 ||||| || | ||||| || | ||||||||||||||| || || | ||||| || || Sbjct 2907 GAGAGGGTGCGGCCATCCTCGAGCTGCTTCCCGGCGAAAATCAGACGCTGTTGATCAGGG 2966 Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 || ||||| |||||||| || ||||| | ||||||| ||||| ||||| | | || Sbjct 2967 GGGATGCCCTCCTTGTCCTGGATCTTCGTCTTGACGTTGTCGATCGTGTCCGACGGCTCA 3026 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | |||||| || || || || |||||||| || || |||||||| Sbjct 3027 ACGTCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTAACAAAGATCTGCAT 3076 Score = 150 bits (166), Expect = 3e-31 Identities = 169/226 (75%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || ||||| || |||||||| || || ||| Sbjct 3078 CCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 3137 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||||||||||||| || || | ||||| || || || Sbjct 3138 AGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAAATCAGACGCTGTTGATCAGGGGGG 3197 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||||||| ||||| ||||| | | || || Sbjct 3198 ATACCCTCCTTGTCCTGGATCTTCGTCTTGACGTTGTCGATCGTGTCCGACGGCTCGACG 3257 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460 || | |||||| || || || || |||||||||||||| ||||||| Sbjct 3258 TCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGACGAAAATCTGCA 3303 >seq9453 Length=4450 Score = 127 bits (140), Expect = 4e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | ||| ||||| ||||| || |||||||| || || ||| Sbjct 1122 CCGCCGCGGAGCCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 1063 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || || || | |||||| || ||||| || || | ||||| || || || Sbjct 1062 AGGGTCCGTCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGTTGATCCGGGGGG 1003 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||| ||||| | | || || Sbjct 1002 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGGCTCGACA 943 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | |||||||||||| || || Sbjct 942 TCGAGGGTGATGGTTTTGCCTGT 920 >seq46587 Length=2385 Score = 123 bits (136), Expect = 5e-23 Identities = 379/575 (66%), Gaps = 22/575 (4%) Strand=Plus/Plus Query 172906 AGGCTTCATCGGCTCGCACGTCGTCATGAAACTCGTTCAGAGGTACCCCGAGTGCAAGGT 172965 ||| |||||||| || |||| | || |||| ||| ||||| ||| ||| || Sbjct 854 AGGATTCATCGGGTCACACGCAGCTATCCTGCTCGCCAAGAAATACCCGCAGTACAACGT 913 Query 172966 GGTGGTGCTCGACAAGATGGACTACTGCGCGACCCTGAACAACCTGG-CAACAGTTCGAG 173024 | | || ||||||| | |||||||| || |||| ||||| | | | | |||||| Sbjct 914 GATTGTATACGACAAGCTCGACTACTGTTCGTGCCTGGCGAACCTCGACGAAATTTCGAG 973 Query 173025 ATGCTCCCAATTTCAAGTTCGTCAAGGGAGA--TATTCAATCTACTGATCTCCTGGCGCA 173082 || || ||||| || || || || || ||| || || | ||||| | | | Sbjct 974 ATTGAAG-AACTTCAAATTTGTGAAAGGCGACATATGCAGTC--CGGATCTTGTATCATA 1030 Query 173083 CGTCCTGAAGCAGGAAAAAATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGA 173142 ||| ||| |||| | | ||||| | |||||||| || || |||||||| || || Sbjct 1031 CGTGATGAGAGAGGAGGACGTCGACACTGTGATGCACTTCGCCGCCCAGACCCACGTCGA 1090 Query 173143 CAACTCGTTCGGTAACTCGCTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTCT 173202 ||||| ||||| || || | || ||| || ||| | |||||||| || || | Sbjct 1091 TAACTCATTCGGAAATTCCTTCAACTTCACCCAGAGCAATATTTACGGGACACATGTCTT 1150 Query 173203 CCTGGAATGCGCGAGGCTCTAT--GGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGAC 173260 || || | || | | | | | || | ||||||||| | || || || ||| Sbjct 1151 GCTTGAGTCGGCTAAGAACCACAAGACGATAAG--GCGGTTCATTCACGTTTCGACGGAC 1208 Query 173261 GAAGTATACGGCGAG----AGCAGTCTGGGCAAAAAAGAAGGCCTCGATGAACACTCGTC 173316 || ||||| |||||| || || || ||| | |||| || | | | | Sbjct 1209 GAGGTATATGGCGAGGGAGAGACGTTTG-----AAACGGAGGCAATGAAGGAGGAGCATG 1263 Query 173317 C-CTCGAGCCAACAAACCCATATGCAGCAGCCAAGGCTGGTGCCGAAATGATGG-CACGT 173374 ||||| || || |||||||| || || |||||||||| || ||| | ||| || || Sbjct 1264 TGCTCGAACCCACGAACCCATACGCCGCCACCAAGGCTGGCGCAGAATTTTTGGTCAAGT 1323 Query 173375 GCATATCACACATCGTACAAGCTACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGC 173434 | ||||||| ||| | ||| || || | | | || || ||||||||||| || ||| Sbjct 1324 -CGTATCACAGATCATTCAAACTGCCCTGCGTGATCACACGTGGCAACAATGTTTACGGC 1382 Query 173435 CCGCATCAGTTCCCCGAAAAAATGATCCCAAAATT 173469 || || |||||||||||||| |||| || ||||| Sbjct 1383 CCACACCAGTTCCCCGAAAAGTTGATTCCGAAATT 1417 >seq33104 Length=5523 Score = 122 bits (134), Expect = 2e-22 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || ||||| |||| ||| ||||| ||||| || ||||| |||||||| || Sbjct 3257 CCACCTCGGAGACGCAAGACCAGGTGGAGCGTCGACTCCTTCTGGATATTATAATCAGAA 3198 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | ||||| || | |||||| || || || || | || ||||| || |||||| Sbjct 3197 AGTGTACGGCCATCCTCCAGCTGCTTTCCCGCAAAAATCAACCTCTGTTGATCCGGTGGA 3138 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGAC 68386 ||||||||||| || || ||||||| ||| || Sbjct 3137 ATGCCTTCCTTATCCTGGATCTTTGTCTTAAC 3106 >seq45459 Length=4245 Score = 118 bits (130), Expect = 2e-21 Identities = 232/343 (68%), Gaps = 20/343 (6%) Strand=Plus/Minus Query 10071 CGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATCA-TGCG 10129 ||||| || |||||| |||||||||| ||| ||| ||||||||||||| || | | | Sbjct 3438 CGGTCGGCACAGAACTCAATGTACTGGCACATGAGGCCCGAGTTCATGCCGATAAGTTCA 3379 Query 10130 GCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTC---------CTC 10180 |||| || ||||| | || ||||| ||| | |||| || | ||| Sbjct 3378 ACAGGAAGTG-CGTCGACGACAAACTCCTTCTCGATCTCGACAGCGTGGGTTACAATCTC 3320 Query 10181 GACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGGAGCTC 10240 |||||| || || | || || ||||||| | || ||||| || ||||| Sbjct 3319 GACGATCCTGCTTTC---------GGGCACCTTGTTCACCAGTTTCGAGTAAAGGAGACA 3269 Query 10241 TCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACC 10300 |||| | ||| || || ||||||||| || | |||||| || |||| ||||| Sbjct 3268 GGCAAAGTCGCAGTGCAGTCCTTCGTCGCGGGAAATAAGCTCGTTTGAGAAACAGAGACC 3209 Query 10301 GGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAG 10360 ||||||||||| || || |||||||| ||||||||||| || ||| ||| | || Sbjct 3208 AGGCATGAGCCCTCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGATCCGCTGAAGAAAAT 3149 Query 10361 ACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAG 10403 ||||| ||| | |||||| | ||||| ||||| ||| Sbjct 3148 GCCCTCGACGGCGGCGAAGGCGATGCACCGCTCCGCGAAAGAG 3106 >seq4998 Length=959 Score = 118 bits (130), Expect = 2e-21 Identities = 232/343 (68%), Gaps = 20/343 (6%) Strand=Plus/Plus Query 10071 CGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATCA-TGCG 10129 ||||| || |||||| |||||||||| ||| ||| ||||||||||||| || | | | Sbjct 287 CGGTCGGCACAGAACTCAATGTACTGGCACATGAGGCCCGAGTTCATGCCGATAAGTTCA 346 Query 10130 GCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTC---------CTC 10180 |||| || ||||| | || ||||| ||| | |||| || | ||| Sbjct 347 ACAGGAAGTG-CGTCGACGACAAACTCCTTCTCGATCTCGACAGCGTGGGTTACAATCTC 405 Query 10181 GACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGGAGCTC 10240 |||||| || || | || || ||||||| | || ||||| || ||||| Sbjct 406 GACGATCCTGCTTTC---------GGGCACCTTGTTCACCAGTTTCGAGTAAAGGAGACA 456 Query 10241 TCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACC 10300 |||| | ||| || || ||||||||| || | |||||| || |||| ||||| Sbjct 457 GGCAAAGTCGCAGTGCAGTCCTTCGTCGCGGGAAATAAGCTCGTTTGAGAAACAGAGACC 516 Query 10301 GGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAG 10360 ||||||||||| || || |||||||| ||||||||||| || ||| ||| | || Sbjct 517 AGGCATGAGCCCTCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGATCCGCTGAAGAAAAT 576 Query 10361 ACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAG 10403 ||||| ||| | |||||| | ||||| ||||| ||| Sbjct 577 GCCCTCGACGGCGGCGAAGGCGATGCACCGCTCCGCGAAAGAG 619 >seq20946 Length=4204 Score = 109 bits (120), Expect = 1e-18 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 68277 TGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGT 68336 |||| ||| || || | || || | || || || | ||||||||||| ||| || || Sbjct 2 TGGACGTTGTAGTCCAAAAGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGTGAAAATCAGA 61 Query 68337 CTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATG 68396 | ||||| || || || ||||| |||| ||| || ||||| ||||||||| | ||| Sbjct 62 CGCTGTTGATCAGGAGGGATGCCCTCCTCGTCCTGGATCTTCGCCTTGACGTTGTTGATC 121 Query 68397 GTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATC 68456 || || | | || || || | ||||||| | || || || |||||||||||||| ||| Sbjct 122 GTTTCCGACGGGTCGACGTCAAGGGTGATGATCTTGCCGGTCAGGGTCTTGACGAAAATC 181 Query 68457 TGCAT 68461 ||||| Sbjct 182 TGCAT 186 >seq47501 Length=4302 Score = 96.9 bits (106), Expect = 6e-15 Identities = 180/262 (69%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 224437 GAATTCAGTGCTGTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGA 224496 ||| || || |||| || || | || || |||||| || | | ||| | |||| | Sbjct 2563 GAACTCGTTGTTGTGCGAGATGATGACGACGCCGCCGTCGTACGTCTCGATGGCGCCGGC 2622 Query 224497 AAGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTG 224556 || ||||| || || |||||||| ||| ||||||||||||| || ||||||| | ||| Sbjct 2623 GAGGGCGCCGAGGGAGTCGCGGTCGAGGTAGTTCGTCGGCTCGTCGAGGATGAGGATGTG 2682 Query 224557 GGGGCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAG-GC 224615 || | ||||| ||| || | | || | ||| |||||||| ||||| ||||| || Sbjct 2683 CGGCTGGTTCCACATGGCAGCGGCGAGGACGACCTTGACCTTCTGCCCGCCCGAGAGCGC 2742 Query 224616 CGCGGATCCGCGAGTGAGTCGTGAATTCGGGGTCAAGACCAATCTTGGCCATATGGTCCT 224675 || || || |||| || ||| || ||| ||||| | | | | || | || Sbjct 2743 CG-ACATTCGGTAGTGCGTGCCGAACTCCTTGTCGAGACCGACGTCCTCGAGGTGCTGCT 2801 Query 224676 CGATGTTCTTGGCAGTCAGGGG 224697 | | |||||||| || |||||| Sbjct 2802 CCACGTTCTTGGTAGACAGGGG 2823 >seq2068 Length=11277 Score = 84.2 bits (92), Expect = 4e-11 Identities = 273/416 (66%), Gaps = 6/416 (1%) Strand=Plus/Plus Query 176100 CCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATTCCGGTTCAATC 176159 |||| || ||||||||| || |||| || ||| || | || |||| ||||||||| Sbjct 4678 CCTG-CGCTCCATTCACAAGAAGAAGTGGAATGACAGGGCAAAAGAATTCGGGTTCAATC 4736 Query 176160 CGGTCGCCGTCATCCTCGAGGTAGTTCAGCAGACGC-TCGTCGGCCTTGTGGAAA-ATAT 176217 ||||||||| || ||||| |||| |||| ||||| | | | ||||| | | Sbjct 4737 GATAGGCCGTCATCTTCCCTGTAGTCGAGCA-ACGCGTCGTCAACTTCGGGGAAACAGAA 4795 Query 176218 CCCGGGTGTTGGGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCTTGCCTC 176277 || | ||||||| || |||||||| || || | || || ||| | || | Sbjct 4796 GCCTAGCTACTGGGGACAAATGAGTGAAGATGTATCTGGGGGATGCGGCGTCATCCCCGC 4855 Query 176278 CGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCGAACCCA 176337 | ||||| | || || || || ||| || |||| ||||| || || || |||| Sbjct 4856 CCATGAGGCGAGTTCCAAACTGGCCAATAGGCAGTAGCAGGTTGATATTGTTTGATCCCA 4915 Query 176338 CGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGATAGC 176397 || ||| || ||||| | || | | || ||| ||||| |||||||||||| Sbjct 4916 CGAAGTTCTGCGCCATACTTGTGATTGTTGCATGAAGACTGGCCTCTCCGTGGTGATAGG 4975 Query 176398 CGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGTACGAGGTTGC 176457 | | || ||| ||| || || || ||||| || ||||| || | || |||| Sbjct 4976 CAGTGTGCTCCGCGCAGTAGCCAGCTAATTGCGCAACCTTGATCTCGTCCTTCAGATTGC 5035 Query 176458 GCTTCAACGCCGAGA-ACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGACGAC 176512 |||| || || | | || |||||| | ||||| ||||| || || || | ||| Sbjct 5036 GCTTGAA-GCAGGCATGCAAAATCTTTCTTTGCGATGGCTTTAGTCCGTCAATGAC 5090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921036109910240