Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thalassiosira_20oceanica_20[genbank_20GCA_5F000296195.2_202012-07- 25] 50,892 sequences; 92,185,637 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq4331 127 2e-24 >seq4331 Length=8668 Score = 127 bits (140), Expect = 2e-24 Identities = 201/288 (70%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 20356 TACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGG 20415 ||| || || ||||| |||| ||| || || || ||||||||| || ||| || || Sbjct 6751 TACGTAGAACTGACAGAACATGTGGCACGGGGGCAGCGCCATCTTGTCCAGGTCGGCGGG 6810 Query 20416 GTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAAT 20475 |||||| || |||| | ||| || | ||| | ||| || || | || || | Sbjct 6811 GTTCCAAGCCGACATGACGATCCTGCGATCCTCCGGGTTGTTCCTGATCTTGTCGATGCA 6870 Query 20476 GTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGC 20535 || | || ||||| | ||||| || | ||||| || | |||| ||||| |||| Sbjct 6871 GTCGGCCAGCTGGTCCACCCCCTTCCCCTTGTAGTCGGCGCGCATGTCCTCGTACTCCGC 6930 Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGC 20595 ||| ||||||||||||||||| ||||| || || || | || |||||| | ||||| Sbjct 6931 CCCGAAGTGCCTCCACTGGAACCCGTACACCGGCCCGAGGTCGCCCTCCTCGCGGTGCGA 6990 Query 20596 CAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATAT 20643 |||||| ||| | | |||||||| | ||||| || ||||||||| Sbjct 6991 CAGGCCCCGCGAGTCGAGGAACTCGCGCGAGCCGTTCCCGTCCCATAT 7038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441092020693280