Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thalassiosira_20oceanica_20[genbank_20GCA_5F000296195.2_202012-07- 25] 50,892 sequences; 92,185,637 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq50892 515 1e-141 seq43102 515 1e-141 >seq50892 Length=141790 Score = 515 bits (570), Expect = 1e-141 Identities = 714/996 (72%), Gaps = 8/996 (1%) Strand=Plus/Plus Query 35973 GCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 36032 |||| || | |||||||||||| |||||||| || ||||| |||||||| ||||| || Sbjct 85549 GCTAAATCTAATGGGAAGTTGTGCGCGTTACGTTCGTGCATTACTTCCATACCTAAATCA 85608 Query 36033 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 36092 |||||||||| || |||||||| || | || | || | |||||||| || || Sbjct 85609 GCACGGTTAATGATATCAGCCCATGTGTTAATAACACGACCTTGAGAATCAACAACAGAT 85668 Query 36093 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 36152 || |||||||| || ||||| | || || ||||| || | ||||||| || | | Sbjct 85669 TGGTTGAAGTTGAAACCGTTTAAGTTGAATGCCATTGTACTAATACCCATAGAAGTTAAC 85728 Query 36153 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAG 36212 || || | || ||||| ||| | |||||| |||||| || || || || Sbjct 85729 CAGATACCTAAAACTGGCCATAAAGCTAAGAAGAAGTGTAAAGCACGTGAGTTGTTGAAT 85788 Query 36213 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 36272 ||| || |||||||| | | |||||||| || || || || || ||||| || || Sbjct 85789 GAAGCGTATTGGAAGATTAAACGACCAAAGTAACCGTGTGCAGCTACGATGTTGTAAGTT 85848 Query 36273 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 36332 ||||||||||| |||||||| || || ||||| ||||| ||||||||||||| Sbjct 85849 TCTTCTTCTTGACCGAATTTGTAACCGTAGTTAGTTGATTCGTTTTCAGTTGTTTCACGG 85908 Query 36333 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 36392 || | ||||| || | |||||||||||| |||||||| ||||||||||| Sbjct 85909 ATTAAACTAGAAGTTACTAATGAACCGTGCATAGCACTGAATAAAGAACCACCGAATACA 85968 Query 36393 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACA 36452 || |||||||| ||| ||||| || ||||| | ||| |||||||| || || || || Sbjct 85969 CCAGCAACACCAGCCATGTGGAATGGGTGCATTAAGATGTTGTGTTCAGCTTGGAATACT 86028 Query 36453 AACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGT 36512 ||||| || || ||||| || || ||||| | ||||||||||||||||||| ||||| Sbjct 86029 AACATGAAGTTAAAAGTACCAGAGATACCTAAAGGCATACCATCAGAGAAAGAACCTTGA 86088 Query 36513 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 36572 || | ||||| ||||||||||| ||| | |||||||| || || || || | ||||| Sbjct 86089 CCGATTGGGTATACTAAGAATACTGCAGAAGCTGCTGCTACTGGAGCAGAGAATGCTACG 86148 Query 36573 CATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 36632 | ||||| || | |||||||| | || || | |||||||| || |||| |||| | Sbjct 86149 AAGATCCAAGGACGCATACCTAAACGGTAGCTTAATTCCCATTCACGACCCATGTAACTT 86208 Query 36633 GAGATACC-AATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCA 36691 | | ||| ||| || ||||| || || || | ||| || || || ||||| |||||||| Sbjct 86209 GCAACACCTAATAAG-AAGTGTAAAACGATTAATTGGTAAGGACCACCGTTGTATAACCA 86267 Query 36692 CTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGA 36751 ||| || | | || ||||||||||||||||||||||| | ||| || ||||| || Sbjct 86268 CTCATCAACTGAAGCTGCTTCCCAGATTGGGTAGAAGTGCATACCAATAGCGTTTGAACT 86327 Query 36752 TGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTC 36811 |||| | ||| || |||||||||||||| || || | ||| | |||| || || || Sbjct 86328 AGGGATAACTGCACCTGAGATGATGTTGTTACCGTATAATAAAGAACCTGCTACTGGTTC 86387 Query 36812 ACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGC---AATTAAAAATGCTGT 36868 ||| |||||||| ||||| || ||||| || || | ||| || || ||| | | || Sbjct 86388 ACGGATACCATCGATATCTACTGGAGGAGCTGCGATAAAAGCGATGATGAAACAAGAAGT 86447 Query 36869 CACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTT 36928 |||||||| | | ||| | ||||| |||||||| || | || | ||||| Sbjct 86448 ---AGCTGTTAATAATAAAGGAAACATTAAACAACCAAACCAACCGATGTATAAACGGTT 86504 Query 36929 GTTTGTACTTGTAACCCAGTCACATAAACTTTCCCA 36964 | |||||||||| ||| | || || | ||||| Sbjct 86505 TTCAGTACTTGTAATCCAAGCGCAGAAGCGCTCCCA 86540 Score = 515 bits (570), Expect = 1e-141 Identities = 714/996 (72%), Gaps = 8/996 (1%) Strand=Plus/Minus Query 35973 GCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 36032 |||| || | |||||||||||| |||||||| || ||||| |||||||| ||||| || Sbjct 126540 GCTAAATCTAATGGGAAGTTGTGCGCGTTACGTTCGTGCATTACTTCCATACCTAAATCA 126481 Query 36033 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 36092 |||||||||| || |||||||| || | || | || | |||||||| || || Sbjct 126480 GCACGGTTAATGATATCAGCCCATGTGTTAATAACACGACCTTGAGAATCAACAACAGAT 126421 Query 36093 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 36152 || |||||||| || ||||| | || || ||||| || | ||||||| || | | Sbjct 126420 TGGTTGAAGTTGAAACCGTTTAAGTTGAATGCCATTGTACTAATACCCATAGAAGTTAAC 126361 Query 36153 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAG 36212 || || | || ||||| ||| | |||||| |||||| || || || || Sbjct 126360 CAGATACCTAAAACTGGCCATAAAGCTAAGAAGAAGTGTAAAGCACGTGAGTTGTTGAAT 126301 Query 36213 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 36272 ||| || |||||||| | | |||||||| || || || || || ||||| || || Sbjct 126300 GAAGCGTATTGGAAGATTAAACGACCAAAGTAACCGTGTGCAGCTACGATGTTGTAAGTT 126241 Query 36273 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 36332 ||||||||||| |||||||| || || ||||| ||||| ||||||||||||| Sbjct 126240 TCTTCTTCTTGACCGAATTTGTAACCGTAGTTAGTTGATTCGTTTTCAGTTGTTTCACGG 126181 Query 36333 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 36392 || | ||||| || | |||||||||||| |||||||| ||||||||||| Sbjct 126180 ATTAAACTAGAAGTTACTAATGAACCGTGCATAGCACTGAATAAAGAACCACCGAATACA 126121 Query 36393 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACA 36452 || |||||||| ||| ||||| || ||||| | ||| |||||||| || || || || Sbjct 126120 CCAGCAACACCAGCCATGTGGAATGGGTGCATTAAGATGTTGTGTTCAGCTTGGAATACT 126061 Query 36453 AACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGT 36512 ||||| || || ||||| || || ||||| | ||||||||||||||||||| ||||| Sbjct 126060 AACATGAAGTTAAAAGTACCAGAGATACCTAAAGGCATACCATCAGAGAAAGAACCTTGA 126001 Query 36513 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 36572 || | ||||| ||||||||||| ||| | |||||||| || || || || | ||||| Sbjct 126000 CCGATTGGGTATACTAAGAATACTGCAGAAGCTGCTGCTACTGGAGCAGAGAATGCTACG 125941 Query 36573 CATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 36632 | ||||| || | |||||||| | || || | |||||||| || |||| |||| | Sbjct 125940 AAGATCCAAGGACGCATACCTAAACGGTAGCTTAATTCCCATTCACGACCCATGTAACTT 125881 Query 36633 GAGATACC-AATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCA 36691 | | ||| ||| |||| ||| || || || | ||| || || || ||||| |||||||| Sbjct 125880 GCAACACCTAATAAGAA-GTGTAAAACGATTAATTGGTAAGGACCACCGTTGTATAACCA 125822 Query 36692 CTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGA 36751 ||| || | | || ||||||||||||||||||||||| | ||| || ||||| || Sbjct 125821 CTCATCAACTGAAGCTGCTTCCCAGATTGGGTAGAAGTGCATACCAATAGCGTTTGAACT 125762 Query 36752 TGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTC 36811 |||| | ||| || |||||||||||||| || || | ||| | |||| || || || Sbjct 125761 AGGGATAACTGCACCTGAGATGATGTTGTTACCGTATAATAAAGAACCTGCTACTGGTTC 125702 Query 36812 ACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGC---AATTAAAAATGCTGT 36868 ||| |||||||| ||||| || ||||| || || | ||| || || ||| | | || Sbjct 125701 ACGGATACCATCGATATCTACTGGAGGAGCTGCGATAAAAGCGATGATGAAACAAGAAGT 125642 Query 36869 CACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTT 36928 |||||||| | | ||| | ||||| |||||||| || | || | ||||| Sbjct 125641 ---AGCTGTTAATAATAAAGGAAACATTAAACAACCAAACCAACCGATGTATAAACGGTT 125585 Query 36929 GTTTGTACTTGTAACCCAGTCACATAAACTTTCCCA 36964 | |||||||||| ||| | || || | ||||| Sbjct 125584 TTCAGTACTTGTAATCCAAGCGCAGAAGCGCTCCCA 125549 >seq43102 Length=56976 Score = 515 bits (570), Expect = 1e-141 Identities = 714/996 (72%), Gaps = 8/996 (1%) Strand=Plus/Plus Query 35973 GCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 36032 |||| || | |||||||||||| |||||||| || ||||| |||||||| ||||| || Sbjct 26260 GCTAAATCTAATGGGAAGTTGTGCGCGTTACGTTCGTGCATTACTTCCATACCTAAATCA 26319 Query 36033 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 36092 |||||||||| || |||||||| || | || | || | |||||||| || || Sbjct 26320 GCACGGTTAATGATATCAGCCCATGTGTTAATAACACGACCTTGAGAATCAACAACAGAT 26379 Query 36093 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 36152 || |||||||| || ||||| | || || ||||| || | ||||||| || | | Sbjct 26380 TGGTTGAAGTTGAAACCGTTTAAGTTGAATGCCATTGTACTAATACCCATAGAAGTTAAC 26439 Query 36153 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAG 36212 || || | || ||||| ||| | |||||| |||||| || || || || Sbjct 26440 CAGATACCTAAAACTGGCCATAAAGCTAAGAAGAAGTGTAAAGCACGTGAGTTGTTGAAT 26499 Query 36213 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 36272 ||| || |||||||| | | |||||||| || || || || || ||||| || || Sbjct 26500 GAAGCGTATTGGAAGATTAAACGACCAAAGTAACCGTGTGCAGCTACGATGTTGTAAGTT 26559 Query 36273 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 36332 ||||||||||| |||||||| || || ||||| ||||| ||||||||||||| Sbjct 26560 TCTTCTTCTTGACCGAATTTGTAACCGTAGTTAGTTGATTCGTTTTCAGTTGTTTCACGG 26619 Query 36333 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 36392 || | ||||| || | |||||||||||| |||||||| ||||||||||| Sbjct 26620 ATTAAACTAGAAGTTACTAATGAACCGTGCATAGCACTGAATAAAGAACCACCGAATACA 26679 Query 36393 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACA 36452 || |||||||| ||| ||||| || ||||| | ||| |||||||| || || || || Sbjct 26680 CCAGCAACACCAGCCATGTGGAATGGGTGCATTAAGATGTTGTGTTCAGCTTGGAATACT 26739 Query 36453 AACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGT 36512 ||||| || || ||||| || || ||||| | ||||||||||||||||||| ||||| Sbjct 26740 AACATGAAGTTAAAAGTACCAGAGATACCTAAAGGCATACCATCAGAGAAAGAACCTTGA 26799 Query 36513 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 36572 || | ||||| ||||||||||| ||| | |||||||| || || || || | ||||| Sbjct 26800 CCGATTGGGTATACTAAGAATACTGCAGAAGCTGCTGCTACTGGAGCAGAGAATGCTACG 26859 Query 36573 CATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 36632 | ||||| || | |||||||| | || || | |||||||| || |||| |||| | Sbjct 26860 AAGATCCAAGGACGCATACCTAAACGGTAGCTTAATTCCCATTCACGACCCATGTAACTT 26919 Query 36633 GAGATACC-AATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCA 36691 | | ||| ||| || ||||| || || || | ||| || || || ||||| |||||||| Sbjct 26920 GCAACACCTAATAAG-AAGTGTAAAACGATTAATTGGTAAGGACCACCGTTGTATAACCA 26978 Query 36692 CTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGA 36751 ||| || | | || ||||||||||||||||||||||| | ||| || ||||| || Sbjct 26979 CTCATCAACTGAAGCTGCTTCCCAGATTGGGTAGAAGTGCATACCAATAGCGTTTGAACT 27038 Query 36752 TGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTC 36811 |||| | ||| || |||||||||||||| || || | ||| | |||| || || || Sbjct 27039 AGGGATAACTGCACCTGAGATGATGTTGTTACCGTATAATAAAGAACCTGCTACTGGTTC 27098 Query 36812 ACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGC---AATTAAAAATGCTGT 36868 ||| |||||||| ||||| || ||||| || || | ||| || || ||| | | || Sbjct 27099 ACGGATACCATCGATATCTACTGGAGGAGCTGCGATAAAAGCGATGATGAAACAAGAAGT 27158 Query 36869 CACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTT 36928 |||||||| | | ||| | ||||| |||||||| || | || | ||||| Sbjct 27159 ---AGCTGTTAATAATAAAGGAAACATTAAACAACCAAACCAACCGATGTATAAACGGTT 27215 Query 36929 GTTTGTACTTGTAACCCAGTCACATAAACTTTCCCA 36964 | |||||||||| ||| | || || | ||||| Sbjct 27216 TTCAGTACTTGTAATCCAAGCGCAGAAGCGCTCCCA 27251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150363474011768