Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thalassiosira_20oceanica_20[genbank_20GCA_5F000296195.2_202012-07- 25] 50,892 sequences; 92,185,637 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq33104 96.9 7e-15 >seq33104 Length=5523 Score = 96.9 bits (106), Expect = 7e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||||| ||||| || || | || | || | ||| || ||||||||||||||| Sbjct 3258 ACCACCTCGGAGACGCAAGACCAGGTGGAGCGTCGACTCCTTCTGGATATTATAATCAGA 3199 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | ||| || |||| |||| || || || ||||| || || ||||||||||| ||||| Sbjct 3198 AAGTGTACGGCCATCCTCCAGCTGCTTTCCCGCAAAAATCAACCTCTGTTGATCCGGTGG 3139 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 192464 || ||||| ||||| || || || | || ||||| Sbjct 3138 AATGCCTTCCTTATCCTGGATCTTTGTCTTAACATT 3103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983838066124200