Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thalassiosira_20oceanica_20[genbank_20GCA_5F000296195.2_202012-07-
25] 50,892 sequences; 92,185,637 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq48315 187 4e-41
seq45459 172 9e-37
seq15199 172 9e-37
seq7404 172 9e-37
seq4998 172 9e-37
seq18823 167 4e-35
seq16290 167 4e-35
seq3768 165 1e-34
seq9868 163 4e-34
seq40553 158 2e-32
seq20960 158 2e-32
seq39595 154 2e-31
seq2764 136 6e-26
seq24354 98.7 2e-14
seq44130 89.7 8e-12
>seq48315
Length=10477
Score = 187 bits (206), Expect = 4e-41
Identities = 337/493 (68%), Gaps = 21/493 (4%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| || |||||||||| ||| |||||||||||||||||||| | |||||||||
Sbjct 2103 CTGGTCGACGTACCGCGCCGTGTTGTTGAAGACGCGGAGCATGGGCACGATGCCGTTGGA 2044
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| |||||| |||||| | ||| | | || ||||| || || || | |||
Sbjct 2043 CGTGCCGTTCGTGCCCCGGATGTACGACGCGGACGCGCGGACGTTCGAGATGGACAGGCC 1984
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || || || |||| ||||| |||||| || || ||||| ||||| ||||| ||
Sbjct 1983 GATCCCCCCCGCGTACTTGCTGATGACCGCGCAGTTCTTGAGCGTGTCGTATATGCCGTC 1924
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| ||||| || | | | | ||| ||||| ||| | |||||| | ||| ||
Sbjct 1923 GATGGAGTCCTCCCTGACGCACGTCAGGAAGCAGCTCGACATCTGCGGGTTGGGCGTCCC 1864
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
||| ||||| ||||||||||| || ||| | || | ||| | | | ||| ||
Sbjct 1863 GGCGTTGAACAGCGTGGGCGTGGCGTGGGTGAAGAACCGCTGGCTGAGGAGGTTGTACGT 1804
Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTG---GCCGATGGC 2073896
|||| || | | | || |||| ||||| ||| |||| ||
Sbjct 1803 CTCGAGGACCCTC------------TCGATGTCG-----CCCAT-GTGTATCCCGACCGC 1762
Query 2073897 GACGCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTA 2073956
||||||||||| | || |||||| |||||| ||| | || ||| |||| ||||||
Sbjct 1761 GACGCGCATGAGGAGGTGCTGGGGACGCTCGGCGATCTGGCCGTGCATCTTGAGCAGGTA 1702
Query 2073957 GGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGAT 2074016
|||| |||||| | ||| ||||| | | | | |||||| |||||| ||||
Sbjct 1701 GGACTTCTCGAGGGTCTTGAAGCCGAAGTAGTCGAACTCGAAGTCGCGGTCGTGGAGGAT 1642
Query 2074017 GGCGGCGTCGAGG 2074029
|||| ||||||||
Sbjct 1641 GGCGCCGTCGAGG 1629
>seq45459
Length=4245
Score = 172 bits (190), Expect = 9e-37
Identities = 234/326 (72%), Gaps = 3/326 (1%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
||||||||||| || | ||||| || ||||| || |||||||| || ||||||
Sbjct 3249 CCTTCGTCGCGGGAAATAAGCTCGTTTGAGAAACAGAGACCAGGCATGAGCCCTCGCTTC 3190
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|||||||| |||||||| ||||| || ||| || ||||||||||||||||| |||
Sbjct 3189 TTGAGCCAGAAGATGGCGCAGAAGGATCCGCTGAAGAAAATGCCCTCGACGGCGGCGAAG 3130
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
||| | |||||| || |||| | | | | | || | |||||| | |||||
Sbjct 3129 GCGATGCACCGCTCCGCGAAAGAGGCATGTCGC---GAGTCGCACCACTTAAGGGCCCAA 3073
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580
| ||||||||| || | ||||| || ||||||||| | |||||| ||| |||
Sbjct 3072 TTCGCCTTTTTCTGAACGCACGGCACGGTCTCGATGGCGTTGAGGAGGTGCATCTTGTCG 3013
Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640
|| ||||||| | ||| |||||||| || | ||| |||||||| ||| ||||||||
Sbjct 3012 GCCTGGTCCTTAATGTATGTGTCGATCAGCAACGAATAGGTCTCACTGTGAATGTTTTCA 2953
Query 794641 ATGGCGATCTGGAAGCCATAAAAGCA 794666
| ||| || || || || || || ||
Sbjct 2952 ACGGCAATTTGAAATCCGTAGAAACA 2927
Score = 118 bits (130), Expect = 2e-20
Identities = 158/217 (73%), Gaps = 6/217 (3%)
Strand=Plus/Minus
Query 794003 GCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGC 794062
||| ||||||| ||| || |||||||| ||| ||||||||||||||||||||| |
Sbjct 3460 GCATCCGAGCGCGTGAAGGAGACGGTCGGCACAGAACTCAATGTACTGGCACATGAGGCC 3401
Query 794063 GGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTC 794122
| |||||||||||| || | || || || | ||| ||||||||| |||||||||||
Sbjct 3400 CGAGTTCATGCCGATAAGTTCAACAGGAAGTGCGTCGACGACAAACTCCTTCTCGATCTC 3341
Query 794123 GACGGCCTCGATGATGATCTGCCTGGGCACG---TCGGACGACGGCTTGTCGACGAGCAT 794179
||| || | | | | |||| | | | |||| | || ||||| || || |
Sbjct 3340 GACAGCGTGGGTTACAATCTCGACGATCCTGCTTTCGGGC-AC--CTTGTTCACCAGTTT 3284
Query 794180 CGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216
|| ||| || || |||||||||||||| ||||| |||
Sbjct 3283 CGAGTAAAGGAGACAGGCAAAGTCGCAGTGCAGTCCT 3247
>seq15199
Length=5857
Score = 172 bits (190), Expect = 9e-37
Identities = 194/258 (75%), Gaps = 4/258 (2%)
Strand=Plus/Minus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
||||||| ||||||||||||||||| || ||||||||| |||| || |||||| | | |
Sbjct 4271 ACTTGGTAACGGCCTTGGTACCCTCGGACACGGCGTGCTTGGCAAGCTCGCCGGGAAGCA 4212
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC--GCTTGTTAGTGCG 1485590
| ||||| ||||||||||||||||||| ||| ||| | || || |||||| |
Sbjct 4211 TGAGGCGGACGGCGGTCTGGATCTCGC--GTGACGAGAGGGTGGCCTTCTTGTTGTAGGT 4154
Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650
|| || ||||||||| | ||||||| |||| |||||||||| || ||||||||
Sbjct 4153 GGCGAGCTTGCCGGCCTCCCCGGCGATGCGCTCGAAGATGTCGTTGATGAAGGAGTTCAT 4094
Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710
||| ||| || ||| ||| || ||||||||| ||||||||||||||||||||
Sbjct 4093 GATGCTCATTCCCTTCTTGCTGATTCCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGTA 4034
Query 1485711 AACAAAGGACGAGTACGA 1485728
| | | |||||| ||
Sbjct 4033 GATGTACGTCGAGTAGGA 4016
>seq7404
Length=3882
Score = 172 bits (190), Expect = 9e-37
Identities = 194/258 (75%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
||||||| ||||||||||||||||| || ||||||||| |||| || |||||| | | |
Sbjct 3145 ACTTGGTAACGGCCTTGGTACCCTCGGACACGGCGTGCTTGGCAAGCTCGCCGGGAAGCA 3204
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC--GCTTGTTAGTGCG 1485590
| ||||| ||||||||||||||||||| ||| ||| | || || |||||| |
Sbjct 3205 TGAGGCGGACGGCGGTCTGGATCTCGC--GTGACGAGAGGGTGGCCTTCTTGTTGTAGGT 3262
Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650
|| || ||||||||| | ||||||| |||| |||||||||| || ||||||||
Sbjct 3263 GGCGAGCTTGCCGGCCTCCCCGGCGATGCGCTCGAAGATGTCGTTGATGAAGGAGTTCAT 3322
Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710
||| ||| || ||| ||| || ||||||||| ||||||||||||||||||||
Sbjct 3323 GATGCTCATGCCCTTCTTGCTGATTCCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGTA 3382
Query 1485711 AACAAAGGACGAGTACGA 1485728
| | | |||||| ||
Sbjct 3383 GATGTACGTCGAGTAGGA 3400
>seq4998
Length=959
Score = 172 bits (190), Expect = 9e-37
Identities = 234/326 (72%), Gaps = 3/326 (1%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
||||||||||| || | ||||| || ||||| || |||||||| || ||||||
Sbjct 476 CCTTCGTCGCGGGAAATAAGCTCGTTTGAGAAACAGAGACCAGGCATGAGCCCTCGCTTC 535
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|||||||| |||||||| ||||| || ||| || ||||||||||||||||| |||
Sbjct 536 TTGAGCCAGAAGATGGCGCAGAAGGATCCGCTGAAGAAAATGCCCTCGACGGCGGCGAAG 595
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
||| | |||||| || |||| | | | | | || | |||||| | |||||
Sbjct 596 GCGATGCACCGCTCCGCGAAAGAGGCATGTCGC---GAGTCGCACCACTTAAGGGCCCAA 652
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580
| ||||||||| || | ||||| || ||||||||| | |||||| ||| |||
Sbjct 653 TTCGCCTTTTTCTGAACGCACGGCACGGTCTCGATGGCGTTGAGGAGGTGCATCTTGTCG 712
Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640
|| ||||||| | ||| |||||||| || | ||| |||||||| ||| ||||||||
Sbjct 713 GCCTGGTCCTTAATGTATGTGTCGATCAGCAACGAATAGGTCTCACTGTGAATGTTTTCA 772
Query 794641 ATGGCGATCTGGAAGCCATAAAAGCA 794666
| ||| || || || || || || ||
Sbjct 773 ACGGCAATTTGAAATCCGTAGAAACA 798
Score = 118 bits (130), Expect = 2e-20
Identities = 158/217 (73%), Gaps = 6/217 (3%)
Strand=Plus/Plus
Query 794003 GCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGC 794062
||| ||||||| ||| || |||||||| ||| ||||||||||||||||||||| |
Sbjct 265 GCATCCGAGCGCGTGAAGGAGACGGTCGGCACAGAACTCAATGTACTGGCACATGAGGCC 324
Query 794063 GGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTC 794122
| |||||||||||| || | || || || | ||| ||||||||| |||||||||||
Sbjct 325 CGAGTTCATGCCGATAAGTTCAACAGGAAGTGCGTCGACGACAAACTCCTTCTCGATCTC 384
Query 794123 GACGGCCTCGATGATGATCTGCCTGGGCACG---TCGGACGACGGCTTGTCGACGAGCAT 794179
||| || | | | | |||| | | | |||| | || ||||| || || |
Sbjct 385 GACAGCGTGGGTTACAATCTCGACGATCCTGCTTTCGGGC-AC--CTTGTTCACCAGTTT 441
Query 794180 CGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216
|| ||| || || |||||||||||||| ||||| |||
Sbjct 442 CGAGTAAAGGAGACAGGCAAAGTCGCAGTGCAGTCCT 478
>seq18823
Length=10442
Score = 167 bits (184), Expect = 4e-35
Identities = 193/258 (75%), Gaps = 4/258 (2%)
Strand=Plus/Minus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
||||||| ||||||||||| ||||| || ||||||||| |||| || |||||| | | |
Sbjct 6835 ACTTGGTCACGGCCTTGGTTCCCTCGGACACGGCGTGCTTGGCGAGCTCGCCGGGAAGCA 6776
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC--GCTTGTTAGTGCG 1485590
| ||||| ||||||||||||||||||||| | ||| | || || |||||| |
Sbjct 6775 TGAGGCGGACGGCGGTCTGGATCTCGCGG--GACGAGAGGGTGGCCTTCTTGTTGTAGGT 6718
Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650
|| || ||||||||| | ||||||| |||| |||||||||| || ||||||||
Sbjct 6717 GGCGAGCTTGCCGGCCTCCCCGGCGATGCGCTCGAAGATGTCGTTGATGAAGGAGTTCAT 6658
Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710
||| ||| || ||| ||| || ||||||||| ||||||||||||||||||||
Sbjct 6657 GATGCTCATTCCCTTCTTGCTGATTCCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGTA 6598
Query 1485711 AACAAAGGACGAGTACGA 1485728
| | | |||||| ||
Sbjct 6597 GATGTACGTCGAGTAGGA 6580
>seq16290
Length=2480
Score = 167 bits (184), Expect = 4e-35
Identities = 193/258 (75%), Gaps = 4/258 (2%)
Strand=Plus/Minus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
||||||| ||||||||||| ||||| || ||||||||| |||| || |||||| | | |
Sbjct 1912 ACTTGGTCACGGCCTTGGTTCCCTCGGACACGGCGTGCTTGGCGAGCTCGCCGGGAAGCA 1853
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC--GCTTGTTAGTGCG 1485590
| ||||| ||||||||||||||||||||| | ||| | || || |||||| |
Sbjct 1852 TGAGGCGGACGGCGGTCTGGATCTCGCGG--GACGAGAGGGTGGCCTTCTTGTTGTAGGT 1795
Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650
|| || ||||||||| | ||||||| |||| |||||||||| || ||||||||
Sbjct 1794 GGCGAGCTTGCCGGCCTCCCCGGCGATGCGCTCGAAGATGTCGTTGATGAAGGAGTTCAT 1735
Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710
||| ||| || ||| ||| || ||||||||| ||||||||||||||||||||
Sbjct 1734 GATGCTCATTCCCTTCTTGCTGATTCCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGTA 1675
Query 1485711 AACAAAGGACGAGTACGA 1485728
| | | |||||| ||
Sbjct 1674 GATGTACGTCGAGTAGGA 1657
>seq3768
Length=6659
Score = 165 bits (182), Expect = 1e-34
Identities = 190/256 (74%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
||||||| ||||||||||| ||||| |||||||||| |||| || |||||| ||| |
Sbjct 1056 ACTTGGTAACGGCCTTGGTCCCCTCGCTGACGGCGTGCTTGGCGAGCTCGCCGGGCAGCA 997
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592
| || || ||||| ||||||||||| | | || || |||| |||||| | |
Sbjct 996 TGAGCCGGACGGCCGTCTGGATCTCCCTCGAGCTGAGCGTGGCCTTCTTGTTGTAGGTGG 937
Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652
|||| ||| |||||| | |||| || |||| |||||||||| || ||||||||||
Sbjct 936 CCAGCTTGCCCGCCTCGCCGGCGATCCGCTCGAAGATGTCGTTGATGAAGGAGTTCATGA 877
Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712
| ||| || ||| ||||||| ||||||||| ||||||||||| |||||||| |
Sbjct 876 TGCTCATGCCCTTCTTGCTGATGCCCGTGTCGGGGTGGACCTGCTTGAGGACCTTGTAGA 817
Query 1485713 CAAAGGACGAGTACGA 1485728
| | |||||||||
Sbjct 816 TGTACGTCGAGTACGA 801
>seq9868
Length=5253
Score = 163 bits (180), Expect = 4e-34
Identities = 192/258 (74%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
||||||| ||||||||||| ||||| || ||||||||| |||| || || ||| | | |
Sbjct 4432 ACTTGGTCACGGCCTTGGTTCCCTCGGACACGGCGTGCTTGGCGAGCTCTCCGGGAAGCA 4491
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC--GCTTGTTAGTGCG 1485590
| ||||| ||||||||||||||||||||| | ||| | || || |||||| |
Sbjct 4492 TGAGGCGGACGGCGGTCTGGATCTCGCGG--GACGAGAGGGTGGCCTTCTTGTTGTAGGT 4549
Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650
|| || ||||||||| | ||||||| |||| |||||||||| || ||||||||
Sbjct 4550 GGCGAGCTTGCCGGCCTCCCCGGCGATGCGCTCGAAGATGTCGTTGATGAAGGAGTTCAT 4609
Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710
||| ||| || ||| ||| || ||||||||| ||||||||||||||||||||
Sbjct 4610 GATGCTCATTCCCTTCTTGCTGATTCCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGTA 4669
Query 1485711 AACAAAGGACGAGTACGA 1485728
| | | |||||| ||
Sbjct 4670 GATGTACGTCGAGTAGGA 4687
>seq40553
Length=1599
Score = 158 bits (174), Expect = 2e-32
Identities = 191/258 (74%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
||||||| ||||||||||| ||||| || || |||||| |||| || || ||| | | |
Sbjct 763 ACTTGGTCACGGCCTTGGTCCCCTCGGACACTGCGTGCTTGGCGAGCTCTCCGGGAAGCA 822
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC--GCTTGTTAGTGCG 1485590
| ||||| ||||||||||||||||||||| | ||| | || || |||||| |
Sbjct 823 TGAGGCGGACGGCGGTCTGGATCTCGCGG--GACGAGAGGGTGGCCTTCTTGTTGTAGGT 880
Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650
|| || ||||||||| | ||||||| |||| |||||||||| || ||||||||
Sbjct 881 GGCGAGCTTGCCGGCCTCCCCGGCGATGCGCTCGAAGATGTCGTTGATGAAGGAGTTCAT 940
Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710
||| ||| || ||| ||| || ||||||||| ||||||||||||||||||||
Sbjct 941 GATGCTCATTCCCTTCTTGCTGATTCCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGTA 1000
Query 1485711 AACAAAGGACGAGTACGA 1485728
| | | |||||| ||
Sbjct 1001 GATGTACGTCGAGTAGGA 1018
>seq20960
Length=7526
Score = 158 bits (174), Expect = 2e-32
Identities = 191/258 (74%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
||||||| ||||||||||| ||||| || ||||| ||| | || || |||||| | | |
Sbjct 1013 ACTTGGTCACGGCCTTGGTTCCCTCGGACACGGCATGCTTAGCGAGCTCGCCGGGAAGCA 1072
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC--GCTTGTTAGTGCG 1485590
| ||||| ||||||||||||||||||||| | ||| | || || |||||| |
Sbjct 1073 TGAGGCGGACGGCGGTCTGGATCTCGCGG--GACGAGAGGGTGGCCTTCTTGTTGTAGGT 1130
Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650
|| || ||||||||| | ||||||| |||| |||||||||| || ||||||||
Sbjct 1131 GGCGAGCTTGCCGGCCTCCCCGGCGATGCGCTCGAAGATGTCGTTGATGAAGGAGTTCAT 1190
Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710
||| ||| || ||| ||| || ||||||||| ||||||||||||||||||||
Sbjct 1191 GATGCTCATTCCCTTCTTGCTGATTCCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGTA 1250
Query 1485711 AACAAAGGACGAGTACGA 1485728
| | | |||||| ||
Sbjct 1251 GATGTACGTCGAGTAGGA 1268
>seq39595
Length=4975
Score = 154 bits (170), Expect = 2e-31
Identities = 190/258 (74%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
||||||| ||||||||||| ||||| || ||||||||| |||| || || ||| | | |
Sbjct 3565 ACTTGGTCACGGCCTTGGTTCCCTCGGACACGGCGTGCTTGGCGAGCTCTCCGGGAAGCA 3624
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC--GCTTGTTAGTGCG 1485590
| ||||| ||||| ||||||||||||||| | ||| | || || |||||| |
Sbjct 3625 TGAGGCGGACGGCAGTCTGGATCTCGCGG--GACGAGAGGGTGGCCTTCTTGTTGTAGGT 3682
Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650
|| || ||||||||| | ||||||| |||| || ||||||| || ||||||||
Sbjct 3683 GGCGAGCTTGCCGGCCTCCCCGGCGATGCGCTCGAAGATATCGTTGATGAAGGAGTTCAT 3742
Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710
||| ||| || ||| ||| || ||||||||| ||||||||||||||||||||
Sbjct 3743 GATGCTCATTCCCTTCTTGCTGATTCCGGTGTCGGGGTGGACCTGCTTGAGCACCTTGTA 3802
Query 1485711 AACAAAGGACGAGTACGA 1485728
| | | |||||| ||
Sbjct 3803 GATGTACGTCGAGTAGGA 3820
>seq2764
Length=7933
Score = 136 bits (150), Expect = 6e-26
Identities = 228/328 (70%), Gaps = 10/328 (3%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| ||||| |||||||||| || || ||| ||| || |||||||| || ||||||
Sbjct 4016 CCCTCGTCTCGACTGATCAGCTCATTCGAGAAGGTGAGTCCAGGCATGAGACCCCGCTTC 4075
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|| ||||| || ||||||||||| |||||||| || || ||||| || | || |||
Sbjct 4076 TTCAGCCAGAATATGGCACAGAAGGACCCCGAGAAGAATATCCCCTCAACAGTAGCGAAG 4135
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
||| |||| |||||| ||||| | || | | ||| ||||| ||||||
Sbjct 4136 GCGATTAGCCTCTCGGCGAAAGTCGCGTTGCTCCC------GATATACTTCTGCGCCCAT 4189
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGC--GAAAGAGGTGGTCCTTCT 794578
||||| || || ||||| ||||| |||| ||| ||| ||| |||
Sbjct 4190 ATCGCCTTCCTCTCGACACTTGGCAC--GGTCGAGTGCGCCGAAAACAGGACCTCCCTCT 4247
Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638
| |||||| | || ||| | ||||| || || || || ||||| ||||||| |||
Sbjct 4248 CCTTCGGGTCGTCGATGTACGAATCGATCAGAAGTGAATACGTCTCCTGGTGGATGCTTT 4307
Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCA 794666
| ||||| ||||||||||| || |||||
Sbjct 4308 CCATGGCCATCTGGAAGCCGTAGAAGCA 4335
>seq24354
Length=8886
Score = 98.7 bits (108), Expect = 2e-14
Identities = 261/402 (65%), Gaps = 2/402 (0%)
Strand=Plus/Minus
Query 2071612 GTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGC 2071671
||||| ||||| ||||| ||||| || ||| | |||||||| | || | ||| ||
Sbjct 7163 GTGCCTAGGTTTTGCTGATTGCTCTTCCCGTTAGCAGCGTCCTTATAAAGGAGGTACGGG 7104
Query 2071672 GCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAG 2071731
|||||||| || ||||| || ||||||| ||| | || ||||| | | | |
Sbjct 7103 TTGCCCGTCTCTATTTGCGCGTCGAGTATGGCCGCCCAGAGCTGCCGCGCTCGTATCT-G 7045
Query 2071732 GTCCTCGCGCGG-CCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTG 2071790
| || | || | |||| |||| ||||| |||||||
Sbjct 7044 GCGCTTGTGCCGTCCCTCCGACTCATACTTCTCGTAGAGCTTCTCAAACTGTTCGCCGTG 6985
Query 2071791 GCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCAC 2071850
||||||| ||||| || |||| ||||| | || ||| | ||| | | |
Sbjct 6984 GCACTCGCCGAGGCCAGGACACTCGTGAGGGCACATCAGGCTCCAAACTCCGTCCTCCTC 6925
Query 2071851 CACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTT 2071910
||||| ||| || |||||| ||| | ||||| || |||| | || || |
Sbjct 6924 GACGCGTTTCATGAAGAGGTCGGGGACCCATAACCCGTAGAACAGATTCCTTGCGCGCTG 6865
Query 2071911 CTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGG 2071970
||||||||| || ||||| ||| |||| |||| ||||| | |||||||||||||||
Sbjct 6864 CTCCTCCTTTCCATGGTTTTTTCGGAGGTTGAGCACGTCGAAAATGTCGGCGTGCCACGG 6805
Query 2071971 CTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012
||| | ||| ||| |||||||| |||||| ||||| ||
Sbjct 6804 CTCGACGTATATGGCGAAGGCGCCGGGGCGCTTCCCGCCACC 6763
>seq44130
Length=14407
Score = 89.7 bits (98), Expect = 8e-12
Identities = 159/227 (70%), Gaps = 9/227 (4%)
Strand=Plus/Minus
Query 653648 CCCGAGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTGGGCAG--CG 653705
||| |||| || ||||| | | || |||||||| || ||||| ||||| || | ||
Sbjct 10172 CCCCAGGTCGGGGACAAGTTCGCCTCCCGCCACGGACAGAAGGGTACCGTCGGGATGACG 10113
Query 653706 TGCGCTCGACCG-AGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACATCGTC 653764
| | || | | |||| ||||| | || | | ||| |||| | |||||||||| ||
Sbjct 10112 TAC---CGGCAGGAGGACATGCCCT--TCAC-GTGCGAGGGCATCGTGCCCGACATCATC 10059
Query 653765 ATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCTCCTG 653824
||||||| ||||||||||| || || |||||||| | || | || ||| ||||
Sbjct 10058 GTCAACCCCCACGCCATCCCATCCCGGATGACCATCGCGCAGCTCATCGAGTGTATCCTC 9999
Query 653825 GGCAAGGTGGCCTGCCGCGAGGGCTACGTGGGCGACGGCACCCCGTT 653871
|| ||||| || | | |||| | || |||||||| ||| || ||
Sbjct 9998 GGGAAGGTCGCGGTCTTCCAGGGGTGCGAGGGCGACGCCACGCCCTT 9952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7910832785841588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |