Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thalassiosira_20oceanica_20[genbank_20GCA_5F000296195.2_202012-07- 25] 50,892 sequences; 92,185,637 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq18371 113 3e-20 >seq18371 Length=23815 Score = 113 bits (124), Expect = 3e-20 Identities = 120/156 (77%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616 ||||| || | | ||||| |||||||| ||||| ||||| || |||||||| |||||| Sbjct 23805 TGTCCGCCACGAAGACGCAAGACCAAATGGAGCGTCGATTCCTTCTGAATGTTGTAATCC 23746 Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676 | | |||||| ||| || |||||||| || || | |||| ||| || ||||||||| Sbjct 23745 GATAAGGTGCGTCCATCCTCAAGTTGTTTTCCGGCGAAGATCAGTCTCTGTTGATCCGGC 23686 Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGAC 29711 || || ||||| ||||| || || ||||| ||||| Sbjct 23685 GGGATCCCCTCCTTGTCCTG-GATCTTTGTCTTGAC 23651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384980269235772