Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thalassiosira_20oceanica_20[genbank_20GCA_5F000296195.2_202012-07- 25] 50,892 sequences; 92,185,637 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2764 84.2 3e-11 >seq2764 Length=7933 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697 ||||| |||| ||| || | || || || || |||||||||||||| ||||| ||||| Sbjct 4016 CCCTCGTCTCGACTGATCAGCTCATTCGAGAAGGTGAGTCCAGGCATGAGACCCCGCTTC 4075 Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAAT 39757 || ||||| ||||||||| || || || || ||||| || || || || | || || Sbjct 4076 TTCAGCCAGAATATGGCACAGAAGGACCCCGAGAAGAATATCCCCTCAACAGTAGCGAAG 4135 Query 39758 GCAACAAGTCTCTC 39771 || | || ||||| Sbjct 4136 GCGATTAGCCTCTC 4149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686471822966880