Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1 _202017-05-22] 10,764 sequences; 18,099,857 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq7460 104 5e-17 >seq7460 Length=1425 Score = 104 bits (114), Expect = 5e-17 Identities = 335/515 (65%), Gaps = 4/515 (1%) Strand=Plus/Plus Query 35207 CTTCGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTG 35266 || || |||||||| || || | || || |||||| | || ||| | || || | Sbjct 679 CTCCGCGACGACACCATCCCGCTGCTGACGACCAAGCGCGTCTTTTGGCGCGGCGTCGCC 738 Query 35267 GAAGAACT-CTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAA 35325 || ||||| ||| ||||||||| |||| | || |||||| || | ||| | Sbjct 739 GAGGAACTGCTC-TGGTTCATCTCGGGCGACACCAGCGCCAAGTCGCTGCAGGAAAAGGA 797 Query 35326 GATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGA 35385 || ||||| ||| ||| || ||||| || | | | |||| | || | || Sbjct 798 CATTCACATTTGGGACGGCAACGGGTCCCGCGCGTACCTTGACAAGATCGGCCTCACGGA 857 Query 35386 TAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGA 35445 | | | ||||| ||| | || ||||| ||||| ||||| ||||| || ||||| || || Sbjct 858 TCGCGAGGAGGGCGATCTCGGCCCCGTTTACGGCTTCCAGTGGCGCCACTTTGGCGCCGA 917 Query 35446 ATATGATACC-TGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATAC 35504 || | ||| || | | || || | || |||| | || || | || | | Sbjct 918 GTACAAGACCATGCACGAC-GAGTACGCCGGCCAGGGCGTAGACCAGCTCGCGCAGCTTG 976 Query 35505 TAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTA 35564 | | ||| | | | || || || | | ||||| | |||| ||||| || Sbjct 977 TGCACACCATCAAAACGAACCCGACGGACCGCCGCATGATCCTCTCGGCCTGGAACCCGG 1036 Query 35565 TGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTA 35624 || | ||||| ||||| || || || ||||||||| || || ||||| ||| | | Sbjct 1037 CGGCGTTCCACCTCATGGCCCTGCCGCCCTGCCACATGTTCGCGCAGTTTTACGTGTCCA 1096 Query 35625 ATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCT 35684 | || || | |||||||| |||| ||||| || || |||| |||||||||||| Sbjct 1097 AGGGCGAGCTCTCGTGCCAAATGTACCAGCGGTCGGGCGACATCGGCCTGGGCGTGCCCT 1156 Query 35685 TCAATATTGCATCATACTCTCTTCTGACTCATCTG 35719 |||| ||||| || ||| | ||||| || |||||| Sbjct 1157 TCAACATTGCCTCGTACGCGCTTCTCACGCATCTG 1191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989447522759620