Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1
_202017-05-22] 10,764 sequences; 18,099,857 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq7460 104 5e-17
>seq7460
Length=1425
Score = 104 bits (114), Expect = 5e-17
Identities = 335/515 (65%), Gaps = 4/515 (1%)
Strand=Plus/Plus
Query 35207 CTTCGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTG 35266
|| || |||||||| || || | || || |||||| | || ||| | || || |
Sbjct 679 CTCCGCGACGACACCATCCCGCTGCTGACGACCAAGCGCGTCTTTTGGCGCGGCGTCGCC 738
Query 35267 GAAGAACT-CTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAA 35325
|| ||||| ||| ||||||||| |||| | || |||||| || | ||| |
Sbjct 739 GAGGAACTGCTC-TGGTTCATCTCGGGCGACACCAGCGCCAAGTCGCTGCAGGAAAAGGA 797
Query 35326 GATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGA 35385
|| ||||| ||| ||| || ||||| || | | | |||| | || | ||
Sbjct 798 CATTCACATTTGGGACGGCAACGGGTCCCGCGCGTACCTTGACAAGATCGGCCTCACGGA 857
Query 35386 TAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGA 35445
| | | ||||| ||| | || ||||| ||||| ||||| ||||| || ||||| || ||
Sbjct 858 TCGCGAGGAGGGCGATCTCGGCCCCGTTTACGGCTTCCAGTGGCGCCACTTTGGCGCCGA 917
Query 35446 ATATGATACC-TGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATAC 35504
|| | ||| || | | || || | || |||| | || || | || | |
Sbjct 918 GTACAAGACCATGCACGAC-GAGTACGCCGGCCAGGGCGTAGACCAGCTCGCGCAGCTTG 976
Query 35505 TAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTA 35564
| | ||| | | | || || || | | ||||| | |||| ||||| ||
Sbjct 977 TGCACACCATCAAAACGAACCCGACGGACCGCCGCATGATCCTCTCGGCCTGGAACCCGG 1036
Query 35565 TGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTA 35624
|| | ||||| ||||| || || || ||||||||| || || ||||| ||| | |
Sbjct 1037 CGGCGTTCCACCTCATGGCCCTGCCGCCCTGCCACATGTTCGCGCAGTTTTACGTGTCCA 1096
Query 35625 ATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCT 35684
| || || | |||||||| |||| ||||| || || |||| ||||||||||||
Sbjct 1097 AGGGCGAGCTCTCGTGCCAAATGTACCAGCGGTCGGGCGACATCGGCCTGGGCGTGCCCT 1156
Query 35685 TCAATATTGCATCATACTCTCTTCTGACTCATCTG 35719
|||| ||||| || ||| | ||||| || ||||||
Sbjct 1157 TCAACATTGCCTCGTACGCGCTTCTCACGCATCTG 1191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989447522759620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |