Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1 _202017-05-22] 10,764 sequences; 18,099,857 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq7528 82.4 8e-11 >seq7528 Length=2088 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || || || || || |||||||| || || | |||| ||||||||| || || || Sbjct 653 GTGGACTCCTTCTGGATGTTGTAGTCACTGAGCGTGCGGCCGTCTTCGAGCTGCTTGCCG 594 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || | || ||||| |||||||| || || ||||| || ||||| || || || || Sbjct 593 GCGAAAATAAGACGCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTC 534 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| |||| || || || | ||| | ||||||||||| | || Sbjct 533 ACGTTCTCGATGGTGTCGCTGGGCTCAACGTCGAGAGTGATGGTCTTGCCGGTGAGCGTC 474 Query 143168 TTTACGAATATTTGCATA 143185 || || || || |||||| Sbjct 473 TTGACAAAGATCTGCATA 456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506946181212480