Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1 _202017-05-22] 10,764 sequences; 18,099,857 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq8122 114 9e-21 >seq8122 Length=2121 Score = 114 bits (126), Expect = 9e-21 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 75018 GGCAGGGCCCTGGTAAAGACAGACCTGGCCGTTAAGATGCCCCCGGGCCTCTACGGCAGG 75077 |||| || || || ||||| ||| ||||||| || | ||| ||||| ||||||| | Sbjct 1534 GGCAAGGGGCTCGTCAAGACCGACGTGGCCGTCCAGGTCCCCGCGGGCACCTACGGCCGC 1593 Query 75078 GTGGCTCCCAGGTCCGGCCTGGCCCTGAAAAAATTTATAGACGTCGGTGCCGGGGTGGTG 75137 ||||| || |||| || || || ||| || || |||||||| || || || | Sbjct 1594 GTGGCGCCGCGGTCGGGGCTCGCGTGGAAGAAGCACATCGACGTCGGCGCGGGCGTCATC 1653 Query 75138 GACCCCGACTACAGGGGCAACCTCGGCGTCATACTGTTTAACTTTGGGTGCGACCCCTTT 75197 |||| ||||||| | || ||| |||||||| | || || ||| || ||| || | Sbjct 1654 GACCGCGACTACCGCGGAAACGTCGGCGTCGTGCTCTTCAACCACGGCGACGAGGCCCTC 1713 Query 75198 CGGGTCAAGAGGGGCGACAGGATAGCCCAGCTCGTGCTCGAGA 75240 |||||| ||||||||||| || |||||||||||||||| Sbjct 1714 GACGTCAAGGTCGGCGACAGGATCGCGCAGCTCGTGCTCGAGA 1756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338720358716256