Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1
_202017-05-22] 10,764 sequences; 18,099,857 total letters
Query= NC_005946.1
Length=105903
Score E
Sequences producing significant alignments: (Bits) Value
seq8122 114 9e-21
>seq8122
Length=2121
Score = 114 bits (126), Expect = 9e-21
Identities = 159/223 (71%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 75018 GGCAGGGCCCTGGTAAAGACAGACCTGGCCGTTAAGATGCCCCCGGGCCTCTACGGCAGG 75077
|||| || || || ||||| ||| ||||||| || | ||| ||||| ||||||| |
Sbjct 1534 GGCAAGGGGCTCGTCAAGACCGACGTGGCCGTCCAGGTCCCCGCGGGCACCTACGGCCGC 1593
Query 75078 GTGGCTCCCAGGTCCGGCCTGGCCCTGAAAAAATTTATAGACGTCGGTGCCGGGGTGGTG 75137
||||| || |||| || || || ||| || || |||||||| || || || |
Sbjct 1594 GTGGCGCCGCGGTCGGGGCTCGCGTGGAAGAAGCACATCGACGTCGGCGCGGGCGTCATC 1653
Query 75138 GACCCCGACTACAGGGGCAACCTCGGCGTCATACTGTTTAACTTTGGGTGCGACCCCTTT 75197
|||| ||||||| | || ||| |||||||| | || || ||| || ||| || |
Sbjct 1654 GACCGCGACTACCGCGGAAACGTCGGCGTCGTGCTCTTCAACCACGGCGACGAGGCCCTC 1713
Query 75198 CGGGTCAAGAGGGGCGACAGGATAGCCCAGCTCGTGCTCGAGA 75240
|||||| ||||||||||| || ||||||||||||||||
Sbjct 1714 GACGTCAAGGTCGGCGACAGGATCGCGCAGCTCGTGCTCGAGA 1756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338720358716256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |