Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1
_202017-05-22] 10,764 sequences; 18,099,857 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq5348 82.4 6e-11
>seq5348
Length=435
Score = 82.4 bits (90), Expect = 6e-11
Identities = 116/159 (73%), Gaps = 3/159 (2%)
Strand=Plus/Minus
Query 33892 CAATCGAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTG 33951
||||| | ||| || | || || ||||| || || || ||| ||||||||| ||||||
Sbjct 283 CAATC-ACACCACCGCGGAGGCGGAGCACGAGGTGCAGGGTGGACTCCTTCTGGATGTTG 225
Query 33952 TAATCTGCCAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTG 34010
||||| || | || || |||| || | ||||||||||| || || |||||||| ||
Sbjct 224 TAATC-GCTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTG 166
Query 34011 ATCCACCGGCACGCTCTCTTTGTCCATAATTTTTTGCTT 34049
||| || | || ||| |||||| ||| || |||||
Sbjct 165 ATCAGGGGGGATGCCCTCCTTGTCCTGAATCTTCTGCTT 127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397010310872728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |