Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1 _202017-05-22] 10,764 sequences; 18,099,857 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq5348 82.4 6e-11 >seq5348 Length=435 Score = 82.4 bits (90), Expect = 6e-11 Identities = 116/159 (73%), Gaps = 3/159 (2%) Strand=Plus/Minus Query 33892 CAATCGAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTG 33951 ||||| | ||| || | || || ||||| || || || ||| ||||||||| |||||| Sbjct 283 CAATC-ACACCACCGCGGAGGCGGAGCACGAGGTGCAGGGTGGACTCCTTCTGGATGTTG 225 Query 33952 TAATCTGCCAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTG 34010 ||||| || | || || |||| || | ||||||||||| || || |||||||| || Sbjct 224 TAATC-GCTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTG 166 Query 34011 ATCCACCGGCACGCTCTCTTTGTCCATAATTTTTTGCTT 34049 ||| || | || ||| |||||| ||| || ||||| Sbjct 165 ATCAGGGGGGATGCCCTCCTTGTCCTGAATCTTCTGCTT 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397010310872728