Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1
_202017-05-22] 10,764 sequences; 18,099,857 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq5216 84.2 2e-11
>seq5216
Length=2424
Score = 84.2 bits (92), Expect = 2e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957
||| ||||||| || || || ||||||||||||||| | | ||| | ||| | |
Sbjct 550 AAGATCGCCGAGCGCCCGCAGCACATGCTCATGCGCGTCTCCGTCGGCATCCACAAGCAC 609
Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017
|||||||| ||| | ||| || ||||| ||||||| || || || |||||||||||
Sbjct 610 GACATCGATCGCGCCATCGAGACCTACGACATGATGTCGCAGAAGTTCTTCACGCACGCC 669
Query 123018 AGTCCCACTTTGTTCGCCGCCGGCAC 123043
| || || | ||| |||||||||
Sbjct 670 ACGCCGACCCTCTTCAACGCCGGCAC 695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451942382969440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |