Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1
_202017-05-22] 10,764 sequences; 18,099,857 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq990 84.2 6e-11
>seq990
Length=4953
Score = 84.2 bits (92), Expect = 6e-11
Identities = 160/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 302629 GCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT 302688
|| || || || ||||| | || || ||||| || ||||| | | ||| | |||
Sbjct 2498 GCCGTGTCGATGAGACCCTCGCGGCCGCCCATGGCGTGGAAATAGAACTCCTGCGGCGAG 2439
Query 302689 AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTG 302748
|| ||| | ||||| |||| ||||| || |||| ||||||| |||| ||||
Sbjct 2438 AGGCCCTTGAGGTAGGAGTTCTCCACGAAGCCGCGCGACTCGGGCCCGAGGTCGTCCTTG 2379
Query 302749 GTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTC 302808
|||||| || || || | || | |||| | ||||| |||| || || |||||
Sbjct 2378 TGAAAGTGCGGGAGCGTGCGGTAGCGAAAGCCAAAGGGGATGCGCTGGCCCTCGACGTTT 2319
Query 302809 TGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864
||||| || | ||| || ||||| ||||| || | | ||||||||||||||
Sbjct 2318 TGCTGGCCGACGCAGCCCATGATCTGGGAAATGTTGATAAAGCTGCCCTTGGAGCC 2263
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471614616115468
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |