Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1
_202017-05-22] 10,764 sequences; 18,099,857 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq7670 82.4 6e-11
>seq7670
Length=1428
Score = 82.4 bits (90), Expect = 6e-11
Identities = 115/157 (73%), Gaps = 16/157 (10%)
Strand=Plus/Minus
Query 34453 GCGCCCAGCTCGCACCCGAAGTACTTTGTC----GGGTAAATGGCCGGACGTCCAAGCGC 34508
|||||||||||||| || ||| |||| ||| ||| |||||| | || ||
Sbjct 191 GCGCCCAGCTCGCAGCCAAAGAACTTGGTCACCTGGGCCGTGGGCCGGTGG----AGGGC 136
Query 34509 CTTGGCGATTTCGG-GCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGA 34567
|| ||||| |||| ||| |||||||||||| |||||||| |||||||| |||||||
Sbjct 135 CTGCGCGATGTCGGCGCA-GTTGACGATGACCGTCTTGATACCGTTGCCGCGGCCTTCGA 77
Query 34568 CCTTGGCGCAGATGCGC---GGCATTTTGTAGCGGTA 34601
||| || |||| || ||||| ||||| |||||
Sbjct 76 TCTT---GCCGATGAGCTTGGGCATCTTGTACCGGTA 43
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412787440858652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |