Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1 _202017-05-22] 10,764 sequences; 18,099,857 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq7670 82.4 6e-11 >seq7670 Length=1428 Score = 82.4 bits (90), Expect = 6e-11 Identities = 115/157 (73%), Gaps = 16/157 (10%) Strand=Plus/Minus Query 34453 GCGCCCAGCTCGCACCCGAAGTACTTTGTC----GGGTAAATGGCCGGACGTCCAAGCGC 34508 |||||||||||||| || ||| |||| ||| ||| |||||| | || || Sbjct 191 GCGCCCAGCTCGCAGCCAAAGAACTTGGTCACCTGGGCCGTGGGCCGGTGG----AGGGC 136 Query 34509 CTTGGCGATTTCGG-GCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGA 34567 || ||||| |||| ||| |||||||||||| |||||||| |||||||| ||||||| Sbjct 135 CTGCGCGATGTCGGCGCA-GTTGACGATGACCGTCTTGATACCGTTGCCGCGGCCTTCGA 77 Query 34568 CCTTGGCGCAGATGCGC---GGCATTTTGTAGCGGTA 34601 ||| || |||| || ||||| ||||| ||||| Sbjct 76 TCTT---GCCGATGAGCTTGGGCATCTTGTACCGGTA 43 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412787440858652