Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1
_202017-05-22] 10,764 sequences; 18,099,857 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq5348 89.7 1e-12
>seq5348
Length=435
Score = 89.7 bits (98), Expect = 1e-12
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | |||||| || || || ||||| || || ||||| || | | |||
Sbjct 263 CGGAGCACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGCTGAGCGTGCGGCCG 204
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || || || ||||| || | |||||||| || || || || |||||
Sbjct 203 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCAGGGGGGATGCCCTCCTTG 144
Query 82716 TCTTGAATCTT-TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| |||||||| ||||| || || || || || || || || || || | || ||
Sbjct 143 TCCTGAATCTTCTGCTTC-ACGTTCTCGATGGTGTCCGAGGGCTCGACATCGAGGGTGAT 85
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTG 82807
||||| || || | ||||||||||| |||||
Sbjct 84 AGTCTTACCCGTGAGGGTCTTTACAAAGATCTG 52
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981691792528996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |