Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1 _202017-05-22] 10,764 sequences; 18,099,857 total letters Query= NC_024771.1 Length=151601 Score E Sequences producing significant alignments: (Bits) Value seq10376 96.9 3e-15 >seq10376 Length=738 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/216 (71%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 107328 CGCACCGTGAGCGTCGTGTTGATGAGGAGCACCCCCTGGAGGGCCCACTTTTCCAGGTAG 107387 |||||||||||| ||||||| |||||||| ||||| |||||||||| ||| | Sbjct 446 CGCACCGTGAGCACGGTGTTGAGCAGGAGCACGCCCTGCTGGGCCCACTTGGTGAGGGAC 387 Query 107388 CCGTGGGCGGGGA-GGCGAAATGCCGGGTAGGTCTTTTGCACCGCCGCGTAGATGTTGCG 107446 ||| | ||| ||||| | | | | | | || | || |||||||||||| Sbjct 386 CCGGTGTTGGGCTTGGCGATCTTCACGTCCG--CCATAGC--CTCCTTGTAGATGTTGCG 331 Query 107447 CAGGCTTGGGGGAACTGGCACCCCCTTTCGCACGCTGAAAGCCAGCCCGTGCGCCTGGCC 107506 || || || | | ||| |||| | ||||| ||| || ||||||||||||||||| Sbjct 330 GAGCGAGGGCGGGATGGCCACGCCCTCTTGCACGGAGAACGCGAGCCCGTGCGCCTGGCC 271 Query 107507 GGGGCCGTGGTAGGGGTCCTGGCCGACGATCACAAC 107542 || |||||||| |||||||| |||| ||| || || Sbjct 270 CGGCCCGTGGTACGGGTCCTGACCGAGGATGACTAC 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484929943895840