Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1 _202017-05-22] 10,764 sequences; 18,099,857 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq8122 91.5 1e-13 >seq8122 Length=2121 Score = 91.5 bits (100), Expect = 1e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 5349 GAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTCTTGGCCGAAGTTGAAGAG 5408 ||||||||| | | |||||| | || ||| || ||| | |||| ||||||||| Sbjct 1746 GAGCTGCGCGATCCTGTCGCCGACCTTGACGTCGAGGGCCTCGTCGCCGTGGTTGAAGAG 1687 Query 5409 CACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCCCACATCCACGAA 5468 ||| || || | ||| || ||| |||| |||| | ||||||||| || || || | | Sbjct 1686 CACGACGCCGACGTTTCCGCGGTAGTCGCGGTCGATGACGCCCGCGCCGACGTCGATGTG 1627 Query 5469 GTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAG 5511 || || |||||| || |||| |||||||||||| |||||| Sbjct 1626 CTTCTTCCACGCGAGCCCCGACCGCGGCGCCACGCGGCCGTAG 1584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447750947003040