Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1
_202017-05-22] 10,764 sequences; 18,099,857 total letters
Query= NC_025963.1
Length=139981
Score E
Sequences producing significant alignments: (Bits) Value
seq8122 91.5 1e-13
>seq8122
Length=2121
Score = 91.5 bits (100), Expect = 1e-13
Identities = 118/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 5349 GAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTCTTGGCCGAAGTTGAAGAG 5408
||||||||| | | |||||| | || ||| || ||| | |||| |||||||||
Sbjct 1746 GAGCTGCGCGATCCTGTCGCCGACCTTGACGTCGAGGGCCTCGTCGCCGTGGTTGAAGAG 1687
Query 5409 CACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCCCACATCCACGAA 5468
||| || || | ||| || ||| |||| |||| | ||||||||| || || || | |
Sbjct 1686 CACGACGCCGACGTTTCCGCGGTAGTCGCGGTCGATGACGCCCGCGCCGACGTCGATGTG 1627
Query 5469 GTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAG 5511
|| || |||||| || |||| |||||||||||| ||||||
Sbjct 1626 CTTCTTCCACGCGAGCCCCGACCGCGGCGCCACGCGGCCGTAG 1584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447750947003040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |