Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1
_202017-05-22] 10,764 sequences; 18,099,857 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq7460 262 5e-65
>seq7460
Length=1425
Score = 262 bits (290), Expect = 5e-65
Identities = 441/633 (70%), Gaps = 4/633 (1%)
Strand=Plus/Minus
Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931
|||||||||||||||||||| || || | | | ||||| || |||||||| |||
Sbjct 1325 ATCTTGAGCTTGGGGAAGGGGCGCGGCTCGCGGTTAAGCTGTTCCTTGAGGGGCTCGACG 1266
Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991
||||| ||| | ||| ||| || | | ||| | || ||||| | ||||||
Sbjct 1265 TGGTTTTTGTAAATGTGGCAGTCGCCGATGACGTGGATGAACTCCCCGGCGCGCAGGCCG 1206
Query 146992 GT-CACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050
|| ||| | | | | || | ||||| |||| ||| ||| ||||||||||| || ||
Sbjct 1205 GTGCACTTTG-CGAGCAGATGCGTGAGAAGCGCGTACGAGGCAATGTTGAAGGGCACGCC 1147
Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTA 147110
|||||| ||||| ||||||| |||||||| |||||||||||||| || | || ||||||
Sbjct 1146 CAGGCCGATGTCGCCCGACCGCTGGTACATTTGGCACGAGAGCTCGCCCTTGGACACGTA 1087
Query 147111 AAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCA 147170
|||||| | |||||||| |||||||| |||||| | | | |||| ||||||||
Sbjct 1086 AAACTGCGCGAACATGTGGCAGGGCGGCAGGGCCATGAGGTGGAACGCCGCCGGGTTCCA 1027
Query 147171 GGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCT 147230
|||||||| | || || | | | |||||| | || || | | || | |
Sbjct 1026 GGCCGAGAGGATCATGCGGCGGTCCGTCGGGTTCGTTTTGATGGTGTGCACAAGCTGCGC 967
Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAA 147289
|||||||| ||||||||||| |||| | ||| ||| | | |||| ||| ||||
Sbjct 966 GAGCTGGTCTACGCCCTGGCCGGCGTA-CTCGTCGTGCATGGTCTTGTACTCGGCGCCAA 908
Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGC 147349
|||| | ||||||||||||||| || || || || ||||| || | | || || ||
Sbjct 907 AGTGGCGCCACTGGAAGCCGTAAACGGGGCCGAGATCGCCCTCCTCGCGATCCGTGAGGC 848
Query 147350 CCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGG 147409
| | | || || || ||||||||| | ||||||| ||| | |||| |
Sbjct 847 CGATCTTGTCAAGGTACGCGCGGGACCCGTTGCCGTCCCAAATGTGAATGTCCTTTTCCT 788
Query 147410 AGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCC 147469
||| ||| | | ||| |||| ||||||||||||||| ||||| || || |
Sbjct 787 GCAGCGACTTGGCGCTGGTGTCGCCCGAGATGAACCAGAGCAGTTCCTCGGCGACGCCGC 728
Query 147470 TCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502
||||||||| | |||||| |||||||| ||||
Sbjct 727 GCCAAAAGACGCGCTTGGTCGTCAGCAGCGGGA 695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583409491689600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |