Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1
_202017-05-22] 10,764 sequences; 18,099,857 total letters
Query= NC_027204.1
Length=194701
Score E
Sequences producing significant alignments: (Bits) Value
seq7460 84.2 3e-11
>seq7460
Length=1425
Score = 84.2 bits (92), Expect = 3e-11
Identities = 191/285 (67%), Gaps = 2/285 (1%)
Strand=Plus/Minus
Query 176375 CGGTTCGCGTTCAAGCTGTTCCTTCACCTGATCGAAGTGATTGTTATAGATGTGGGTATC 176434
||| ||||| | |||||||||||| | | |||| ||| || || || |||||| ||
Sbjct 1302 CGGCTCGCGGTTAAGCTGTTCCTTGAGGGGCTCGACGTGGTTTTTGTAAATGTGGCAGTC 1243
Query 176435 ACCAAGGTTGCCGATCAGTTCCCCGACTTCCAAGCCGCATTCCAGCGCGATCAGATGTGT 176494
|| | | | ||| | |||||| | || |||| | |||| |||||| ||
Sbjct 1242 GCCGATGACGTGGATGAACTCCCCGGCGCGCAGGCCGGTGCACTTTGCGAGCAGATGCGT 1183
Query 176495 CAGGAGTGCGTAAGAGGCGATGTTGAATGGAAGCCCCAAGAAGACGTCCACGGACCGCTG 176554
|| || ||||| ||||| |||||||| || | |||| | || ||| | ||||||||
Sbjct 1182 GAGAAGCGCGTACGAGGCAATGTTGAAGGGCACGCCCAGGCCGATGTCGCCCGACCGCTG 1123
Query 176555 ATTCCAAAGGCAGGACAGTTTCCCGTTGCGGACATAGAACTG-GAAACCGTAGTGACACG 176613
| | |||| || || | || ||| || || ||||| | | | | ||| || |
Sbjct 1122 GTACATTTGGCACGAGAGCTCGCCCTTGGACACGTAAAACTGCGCGAACAT-GTGGCAGG 1064
Query 176614 GCGGCAAAGCCATTAGATCGACCGCCCCGACATTCCAAGCCGAGA 176658
|||||| ||||| || | || |||| | ||||| |||||||
Sbjct 1063 GCGGCAGGGCCATGAGGTGGAACGCCGCCGGGTTCCAGGCCGAGA 1019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622831386759840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |