Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1
_202017-05-22] 10,764 sequences; 18,099,857 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq10376 125 9e-24
>seq10376
Length=738
Score = 125 bits (138), Expect = 9e-24
Identities = 267/391 (68%), Gaps = 16/391 (4%)
Strand=Plus/Minus
Query 184419 GTGAAGACGGCGTGCTTGGACTTGTCCACCAGACCGGCCTTCTCCTTGGCGTGGTTGCCC 184478
|||| |||| |||||||||| ||| || | |||||||||||| |||||| ||||||
Sbjct 611 GTGATGACGAGGTGCTTGGACCGGTCGACGAAGGCGGCCTTCTCCTGGGCGTGCTTGCCC 552
Query 184479 CAGAGCAGGAAGACCAGGCCCTCGGTCTTCTTGGAGAGTTG----CGTG-ATGACCCTGT 184533
||||||| |||||| |||||| | ||| |||| | ||| || | |||||| ||
Sbjct 551 CAGAGCATGAAGACGAGGCCC---GACTT-TTGGTCA-TTGAGCACGCGAATGACCTGGT 497
Query 184534 CGCTGAGCACCCTCCAGCCCAGGTTGGAGTGCGACCCGGGCACGCCTCTGATCACGGTGA 184593
| ||| | |||||| | || |||||| | | || ||| ||| ||||
Sbjct 496 CAGTGAACTTTTCCCAGCCGAATTTCTTGTGCGAGTGCGCCTCGGACCTGCGCACCGTGA 437
Query 184594 AGGCCGTGTTCAGCAGGAGCACCCCCTGGCGCGCCCAGCTGTCGAGGTGGCCGTGGTTGG 184653
| ||||| ||||||||||| ||||| | ||||| || |||| ||| |||||
Sbjct 436 GCACGGTGTTGAGCAGGAGCACGCCCTGCTGGGCCCACTTGGTGAGGGACCCGGTGTTGG 377
Query 184654 GCGTCCGGAACCCCTCGATGGAGCGTTGCAGCTCCCTGTAGATGTTGCGCAGCGACGGCG 184713
|| | || | | || | | | || |||| ||||||||||||| ||||| ||||
Sbjct 376 GCTTGGCGATCTTCACG-TCCGCCATAGC--CTCCTTGTAGATGTTGCGGAGCGAGGGCG 320
Query 184714 CCACGGCC---CCGTCACCCGTGGAGAAGGCCAGGCCGTCGGCGCGACGGGGTTGCGGGT 184770
| |||| || || | |||||| || || |||| || | | || |||
Sbjct 319 GGATGGCCACGCCCTCTTGCACGGAGAACGCGAGCCCGTGCGCCTGGCCCGGCCCGTGGT 260
Query 184771 ACGGGTCCTGACCCACGATGACGACCTTGAC 184801
||||||||||||| | |||||| ||||||||
Sbjct 259 ACGGGTCCTGACCGAGGATGACTACCTTGAC 229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658650566640640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |