Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1
_202017-05-22] 10,764 sequences; 18,099,857 total letters
Query= NC_031058.1
Length=58566
Score E
Sequences producing significant alignments: (Bits) Value
seq6165 87.8 7e-13
>seq6165
Length=720
Score = 87.8 bits (96), Expect = 7e-13
Identities = 189/275 (69%), Gaps = 6/275 (2%)
Strand=Plus/Minus
Query 31005 CCATGCACATGTG-TCGCGCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCG 31063
||||||||||||| ||| |||| |||| || ||||||||| || || ||| |||
Sbjct 604 CCATGCACATGTGCTCG-GCCTCGATGATGACGGCGACGCCCTGGGGGTCGAGGATCTCC 546
Query 31064 AACAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATAC 31123
| | || || |||||||| |||||| || ||||| || || ||||| || || ||
Sbjct 545 ATGATGGCCTCGGCGATCTGCGTTGTGAGGCGCTCCTGGACCTGGAGGCGACGCGCGAAC 486
Query 31124 ATGTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCTG 31183
|| || | ||| | |||||| ||||| | ||| || | || || ||||| |
Sbjct 485 ATCTCGCTGACGCGCGCGAGCTTGGAAAGGCCGAGGATGCGGCGCTTGGGGATGTAACCA 426
Query 31184 ATCGTGAC-CGTGCCGAAGATCGGCGCGAGGTGATGCTCGCA-ATGTGAGTAGATGGGGA 31241
|| ||| | | |||| || ||| ||||||| |||||||| ||| || ||| | ||
Sbjct 425 AT-GTGGCACTTGCCCTTGAAGGGCACGAGGTGGTGCTCGCACATG-GAAAAGAGGTCGA 368
Query 31242 TGTCGCGCACCGTCACCATCTGGTCATGCTTCTCC 31276
|||| || | ||||||| || || | ||||
Sbjct 367 TGTCTTTGACGATGACCATCTCGTGGTGGTCCTCC 333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 187265660175104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |