Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq419 95.1 1e-14 >seq419 Length=23932 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || |||| | ||| |||| |||||| || || |||||||| || || ||||| | Sbjct 23284 CCACCACGCAAACGGAGGACCAAATGCAATGTAGATTCCTTTTGGATATTGTAGTCGCTC 23225 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | |||| || |||||||| || ||| | ||||| | || || || || Sbjct 23224 AAAGTTCGTCCGTCTTCGAGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGA 23165 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || |||||||||||||| | | ||| | || || || Sbjct 23164 ATGCCTTCCTTATCTTGAATCTTTTGTTTCACGTTGTCGATGGAGTCCGATGGTTCGACG 23105 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||| ||||| || || || ||||| |||||||| Sbjct 23104 TCAAGTGTGATCGTCTTACCGGTCAAAGTCTTAACAAAGATTTGCAT 23058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422231754867428