Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2584 82.4 5e-11 >seq2584 Length=5567 Score = 82.4 bits (90), Expect = 5e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| ||||||||||| | | ||||| || |||||| | || || ||||| Sbjct 3377 GCCTTTGCTGCTGTTGAAGGTATTTTCTTTTCAGGATCATTTTGCTCGATCTTTTGGCTC 3318 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||||||| | ||||| || || ||||| ||||| | ||| ||||| || Sbjct 3317 AAGAAACGTGGTTTGATGCCTGGTTTAAGCTTTTCGAACGAACTTATTTCTCGTGATGAG 3258 Query 22870 GGTCTACACTGTGACTTTGCTTG 22892 ||||| || ||||||||||| || Sbjct 3257 GGTCTTCATTGTGACTTTGCCTG 3235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356210446263199