Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq349 87.8 3e-12 >seq349 Length=38488 Score = 87.8 bits (96), Expect = 3e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 70316 ATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCT 70375 ||||| || || ||| |||||||| || |||||||| || ||||||||||||||| || Sbjct 16774 ATGTACCAAAGATCTGCTGACATGGGTCTTGGTGTACCTTTCAACATTGCAAGCTATGCT 16715 Query 70376 ATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACC 70435 | | |||| |||||||||||| | || ||||||| || || | || | Sbjct 16714 CTTCTCACGCGCATGATTGCTCAAGTGTGTGGTTTGAAAGCTGGAGATTTTATCCATGTC 16655 Query 70436 ATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGG 70481 ||||| || || || |||||| | || ||||| || || | |||| Sbjct 16654 ATTGGGGATGCCCATGTGTATCTTAACCACATTGAACCTCTCAAGG 16609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741009799141080