Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq2069 95.1 5e-14 >seq2069 Length=6660 Score = 95.1 bits (104), Expect = 5e-14 Identities = 109/146 (75%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 309700 ATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTG 309759 || |||||||| || ||||| || ||||||| | || ||| |||||| | | || | Sbjct 4276 ATTGTCATACGCGATGGAATAGCGTGAGGGTTCACGATAATATCAGGTGTGACGCCTTCG 4217 Query 309760 ATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAATAGTTCCCTTTTGAGCG 309819 || | | |||||||||||||||| | | ||| |||||| || ||||||||| || Sbjct 4216 ATGG---TAAAAGGCATATCTTCTTGACGATATGTCATACCAATCGTACCCTTTTGACCG 4160 Query 309820 TGCCTGGAAGCAAACTTGTCACCAAT 309845 || | |||||||||||||| ||||| Sbjct 4159 TGACGAGAAGCAAACTTGTCCCCAAT 4134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951841023419224