Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1925 84.2 3e-11 >seq1925 Length=14366 Score = 84.2 bits (92), Expect = 3e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219 || |||||||||||||| ||| || || | ||||| | | || | ||||||||| Sbjct 8394 ATCAAAGTTGCTCAATTGGCTGGTTACGTCTCTGAACACTCTGCATACCATCATGGTGAA 8335 Query 165220 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 165279 || |||| || || || ||| | || ||||| | |||||| | || ||| || Sbjct 8334 GCAAGTTTACATGGGACGATCATTGGTATGGCACAAGACTATGTTGGAAGCAACAATTTA 8275 Query 165280 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGC 165338 |||||| ||| |||| ||||||||||| | ||| |||| ||||||||| |||| Sbjct 8274 AATTTACTTTCTCCTAATGGGCAATTTGGTACTCGTTTACAAGGTGGTAAAGATGCTGC 8216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628489300538880