Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq2565 105 2e-17 >seq2565 Length=8897 Score = 105 bits (116), Expect = 2e-17 Identities = 160/226 (71%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 189015 CATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGG 189074 |||||| || ||||||||||| ||||| ||||| |||||| || | ||||| | ||||| Sbjct 7726 CATTACACGTGATGTATCTGGTGAAGGTGTACAACAAGCTCTACTCAAAATGCTGGAAGG 7785 Query 189075 TACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGA 189134 | || || |||||| |||||||||| ||| | |||| ||| | || Sbjct 7786 TTGTACTGTAAACGTTCCTGAAAAAGGTGGTCGAAAAAATCCTCGTGGGGAATTCATTTC 7845 Query 189135 AATAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACAT 189194 || ||||| || ||||| || || ||| |||||| || |||| ||| |||||| |||| Sbjct 7846 CATCGATACCACCAATATTTTATTCATTTGTGGTGGTGCATTTGCTGGCCTTGAACACAT 7905 Query 189195 --TATCAAGAGACGCGCTACAAAATCAACTTTAGGTTTTGATGATA 189238 |||| ||||| | || |||| || | || ||||||| || Sbjct 7906 CGTATC--TCGACGCACAGCACAATCCTCTATTGGATTTGATGCTA 7949 Score = 86.0 bits (94), Expect = 2e-11 Identities = 181/264 (69%), Gaps = 6/264 (2%) Strand=Plus/Plus Query 188740 GATGGAGTAAAGATCAAAAAATCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAA 188799 |||| ||| | || | ||| ||||| ||||| | ||||| || || ||||| || || Sbjct 7403 GATGAAGTGGAAATTGATAAAACTAATATTCTTGTGGTTGGACCAACAGGTTCGGGAAAG 7462 Query 188800 ACATTATTTGCTCAAACATTGGCT-GATATGTTACATGTACCTCTAGCTATCTCTGATGC 188858 || | | || |||| || || || || | || || ||| | | || ||||||| Sbjct 7463 ACTCTGATGGCAAAAACTTTAGCACGACTTGCT-CAAGTTCCTTTGGTCATTGCTGATGC 7521 Query 188859 AACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTC--GT 188916 || | ||| || |||||||||| || ||||||||||| | || || || | | | Sbjct 7522 TACGTGTTTGACTCAAGCTGGTTACGTTGGTGAAGATGTCG-AATCGATTTTGTACAAAT 7580 Query 188917 TTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGAT 188976 | || ||||||||| | | ||| | ||| | ||||||| || | ||||| ||| Sbjct 7581 TGTAT-CAAGCAGCTAACTTCGACGTTGAAGCTACACAACGTGGTATCATTTATATTGAT 7639 Query 188977 GAAGTAGATAAAATTGCTAGAAAA 189000 ||| | ||||||||| |||| ||| Sbjct 7640 GAAATTGATAAAATTTCTAGGAAA 7663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591801626254784