Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq349 91.5 1e-13 >seq349 Length=38488 Score = 91.5 bits (100), Expect = 1e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 118465 TTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCA 118524 || || || |||||||| || | ||| ||||| ||||||||||| ||| || || || Sbjct 16611 TTGAGAGGTTCAATGTGGTTAAGATACACATGGGCATCCCCAATGACATGGATAAAATCT 16670 Query 118525 CCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACA 118584 |||| | | | || || |||||||||||| || | | | ||||| || | Sbjct 16671 CCAGCTTTCAAACCACACACTTGAGCAATCATGCGCGTGAGAAGAGCATAGCTTGCAATG 16730 Query 118585 TTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACA 118627 || ||||| ||||| ||||||||||| || ||||| ||||||| Sbjct 16731 TTGAAAGGTACACCAAGACCCATGTCAGCAGATCTTTGGTACA 16773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414449860691812