Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq2069 96.9 5e-15 >seq2069 Length=6660 Score = 96.9 bits (106), Expect = 5e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 63746 TACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGTATGA 63805 |||| |||| || || || ||||||||| | | |||||| |||||| |||||||| Sbjct 4126 TACCTCAAATTGGGGACAAGTTTGCTTCTCGTCACGGTCAAAAGGGTACGATTGGTATGA 4185 Query 63806 TTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATCA 63865 ||||| |||||||||||||||||||||| || || || ||| ||| | || | | Sbjct 4186 CATATCGTCAAGAAGATATGCCTTTTACCATCGAAGGCGTCACACCTGATATTATCGTGA 4245 Query 63866 ATCCACACGCTTTTCCCAGTCGTATGAC 63893 | || |||||| |||| |||||||| Sbjct 4246 ACCCTCACGCTATTCCATCGCGTATGAC 4273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667030731099480