Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq277 93.3 4e-14 >seq277 Length=566994 Score = 93.3 bits (102), Expect = 4e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||||||||||||||| || ||||| || || |||| ||||||||| |||| |||| Sbjct 257392 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 257333 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGG 17096 | | ||| || || || ||||| || ||||| ||||| || ||||| |||| Sbjct 257332 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGG 257282 Score = 93.3 bits (102), Expect = 4e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||||||||||||||| || ||||| || || |||| ||||||||| |||| |||| Sbjct 272204 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 272263 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGG 17096 | | ||| || || || ||||| || ||||| ||||| || ||||| |||| Sbjct 272264 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGG 272314 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || ||||| || ||||||||||| || ||||| |||||||||||||| ||||| Sbjct 256981 ATGTAGGTGTCGATCAGGAGGCTGTACATCTCTGAGTGGATGTTCTCCATGGCGATCTGG 256922 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 || || || || || ||||| |||| | || |||||| Sbjct 256921 AAACCATAGAAACAGCGGGCCTCCGTCACCTGCACTTCC 256883 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || ||||| || ||||||||||| || ||||| |||||||||||||| ||||| Sbjct 272615 ATGTAGGTGTCGATCAGGAGGCTGTACATCTCTGAGTGGATGTTCTCCATGGCGATCTGG 272674 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 || || || || || ||||| |||| | || |||||| Sbjct 272675 AAACCATAGAAACAGCGGGCCTCCGTCACCTGCACTTCC 272713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517348842101520