Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq49 517 1e-141 seq56 96.9 4e-15 >seq49 Length=1117640 Score = 517 bits (572), Expect = 1e-141 Identities = 1303/1964 (66%), Gaps = 29/1964 (1%) Strand=Plus/Minus Query 53087 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 53146 ||||| ||||| || ||||| | | |||||| || | || | || ||||| || || Sbjct 732473 TTCTTCATCTCCTCGTTCCACAGTCCTCTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTG 732414 Query 53147 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 53206 || | ||||| ||||| |||| || || || ||||| || || ||||| || | ||| Sbjct 732413 ACGATCTGAAACTCTCCCGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCG 732354 Query 53207 ACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAAT 53266 | ||||| || || |||| || || || || || || || ||||| || |||| || Sbjct 732353 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGCAGC 732294 Query 53267 AAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGA 53326 | || || || | || | | | |||||| || || || | | ||| | ||| ||| Sbjct 732293 AGGCTGTTCCTCACGCCATGTTTGGCGATTTTCTCCTTCAGCAGCTTCCAGTCCCAGAGA 732234 Query 53327 TCCGACGGTACAACNNNNNNNNNNNNNNNT--TGTAGAATACCGTTACTGGCGTACGATC 53384 || | ||| | | | || || || || || ||| | || | Sbjct 732233 TCGGTCGG--CGTCTTCTCCCACATGTCGTACTGCAGGATGCCCTTGCTGACCGGGGAGC 732176 Query 53385 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 53444 | | || || ||||| || || || | || || || || |||||||| | || Sbjct 732175 CCTCGTACGTCTCGTAGGGGCCGAGCTCGGCCGCCAGCTCGCAGCTCGCCTCCAGAGCGG 732116 Query 53445 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 53504 |||| ||||||||||||||||| | | || || ||| || || |||| ||||| | Sbjct 732115 CGTAGTAAATGGTTTCGAAGATGTGGATGTTGAGCAGTTGAGCCTCTGGGCTTTCAAACG 732056 Query 53505 GATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTAT 53564 | | | | |||||| || ||||| ||||| || || || || || ||||| || || | Sbjct 732055 GGTGACGCATGAGAATGAAGGCGTCGGCTAAACCCTGGACTCCGATTCCGATCGGCCTGT 731996 Query 53565 GTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 53624 | | ||| || ||| | || ||||| || | || || || || || || ||||| || | Sbjct 731995 GGCGCTTGTTCGAGTTCTCGGCTTCCGGTACCGGGTAGTAGTTGATCTCGATAATCTTGT 731936 Query 53625 TGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCC-A 53683 | |||||| |||| ||||||||| ||||| |||||| ||||||||| |||| Sbjct 731935 TCAGGTTTTTGACGATTACTTTGGTCACATATGCCAGTTTCTTAAAATCAAA-AGTCCGC 731877 Query 53684 TCT---ATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCAT-- 53738 ||| | || ||||||| | || || || ||||| ||||| || |||||||| | Sbjct 731876 TCTGGGGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTACAGACCGCTACCTCGTCC 731817 Query 53739 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 53798 | || | |||| | || || ||||| || || || ||||| ||||| || | || Sbjct 731816 TTGC--TGGTGTATTCAACAATTTCGGTGCACAGGTTGCTGCACTTTATGGTGCCCAGAT 731759 Query 53799 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTT 53858 | || || || ||||| |||| || || || || || || ||| ||||||| ||||| | Sbjct 731758 TCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTATGGCGTTCCAGTCT 731699 Query 53859 CAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA-GATTTGTAT 53917 | |||| || || || || || | ||| | ||||||| | | | | || | | Sbjct 731698 CTGTCTGCGACTCAATGATGGCGTACCACAGCTGCTGAGCCTTCACCACACGCTTGGCCT 731639 Query 53918 CTCTTTTCTCTTTCGTA--TAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGT 53975 | | || | || || | ||||| | || |||||||| || ||||| | | Sbjct 731638 TGCCCTCCT-TCTCATACCTGGTGTAGAGCTTC--TCAAACTCCTCCCCCCAGCACTCAT 731582 Query 53976 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 54035 ||| ||||| || | | |||||||||| ||||| || || || ||||| | Sbjct 731581 CCAGACCAGGGCAGGCGTTGGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACTCTCT 731522 Query 54036 TCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCG 54094 |||| || |||||||| ||||| | || || ||| || ||||||| || || ||||| Sbjct 731521 TCATGAACAGATCAGGGATCCACATGGCGTAGAAA-AGGTCTCTGGCCCTCTGCTCCTCC 731463 Query 54095 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 54154 |||||||| ||||| || || || ||||| | | | ||| | ||||| || || | | Sbjct 731462 TTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCAAAGTGCCAGGGCTCTAGG 731403 Query 54155 TATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 54214 || |||| | |||| || | ||||| || ||||| || | ||| | || ||||| Sbjct 731402 TACATGGCGAAGGCTCCGGGTCTCTTGTTGCCCCCCTGGTCGACGTAGCGTGCCGTGTTG 731343 Query 54215 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 54274 || |||||||||| ||| || | | || ||||| || ||||| || ||||| ||| Sbjct 731342 TTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGAGTTTCCGTTGGTGCCAGAGATGTAG 731283 Query 54275 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATT 54334 || || | | | || || | | | ||| || || || || || ||||| Sbjct 731282 CTCCCTGTAGATCTGATGCAGCTGACCGCCACACCGATGCCTCCAGCTGACTTGGAGATG 731223 Query 54335 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 54394 | || || | || | ||| || |||||||| || || || || ||| ||||| || Sbjct 731222 AGGGCACACTGCTTCAGCGTGTCGTAGATGCCTTCAATGCTGTCGTCCTTCATGGCGAGC 731163 Query 54395 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 54454 || || ||||| |||| || | | | || || || || || | || || || ||| Sbjct 731162 AGGAAGCAGCTGGACAGCTGAGGCCTGTTGGTCCCAGCGTTGAAGAGAGTCGGGGAGGCG 731103 Query 54455 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCAT 54514 || || ||||| || || || || || ||||| ||||| || |||| || |||||| Sbjct 731102 TGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTCTCAATCGCTGCATCGATATCCGTC 731043 Query 54515 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 54574 | || |||||||| | ||| | ||| | ||||||||| |||| || | | ||| | Sbjct 731042 TTGTGGATTCCTACAGAGACTCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCG 730983 Query 54575 TTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 54634 || || ||||||| ||| || |||| ||| || || || || ||||||| || || Sbjct 730982 TTGATCTTCAGCAGGTACGAACGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAA 730923 Query 54635 TCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG 54694 ||||| ||||| || || ||||||||| || || | || ||| | || | Sbjct 730922 TCTCGGTCGTAGATTATGGACGAGTTGAGTCGGTCTTTGTTTTCTAGAACGATGTCAAGC 730863 Query 54695 GTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTA--GGATTGACATAGTTAAAT 54751 || | ||| || || || || || || | | || | || |||| ||||| | Sbjct 730862 GT-CTCCTTGGAGATCATAGGTGA--GTGGCGTTTGTTCAGGGGGTTGATGTAGTTGTAC 730806 Query 54752 AAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCT 54811 | |||| |||||| || || || | ||| || || |||||||| || || || ||||| Sbjct 730805 AGGTCCTCCATCACGTCGCTGAACACTTTCTTAGTCTCTTTGTGCAGGTTGGAGACGGCG 730746 Query 54812 ATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCG 54871 || | ||| || || ||||| || || || |||| || || ||||| || || || Sbjct 730745 ATCCGAGCAGCGAGGATGGCGTAGTCGGGGTGTTTAGTTGTGAGCGTGGCAGCGATCTCT 730686 Query 54872 GCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTC 54931 |||| ||| ||||| | || || || || ||||| | || | || ||||| |||||| Sbjct 730685 GCTGCCAGCGTGTCGAGCTCCACAGTGGTGACTCCGCTGTACAGACCCTGGATCACCTTC 730626 Query 54932 ATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCT-AAT 54990 || | || | || || | | |||| ||| | || || || || |||| || Sbjct 730625 ATGGTGATCTGGGCCGGGTCCACAAAGTCAGAGTTCAGCCCGTAGCA-AAGCTTCTGGAT 730567 Query 54991 ACGAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCAT 55034 ||||| |||||||| || |||||||| ||||| | ||||| Sbjct 730566 GCGAGAGGTGATTTTGTCGAACATGACGCGTTCCTGGCGTCCAT 730523 >seq56 Length=1093683 Score = 96.9 bits (106), Expect = 4e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| || | ||| || ||||||||||| || || || || || || | || || || | Sbjct 338076 CACTGAACACTTTCTTGGTTTCTTTGTGCAGGTTAGAAACTGCGATCCGTGCAGCCAGGA 338135 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 | ||||| || ||||||| || || ||||| ||| | || |||| ||||||||||| Sbjct 338136 TTGCATAGTCAGGATGTTTAGTGGTGAGGGTGGCCGCTGTCTCTGCTGCCAGAGTGTCCA 338195 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 || || || || |||||| | || | || ||||| |||||||| Sbjct 338196 GCTCCACAGTGGTGACTCCACTGTACAGACCCTGGATCACCTTCAT 338241 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| || || || ||||| || || |||||| ||| | || || || |||||||||| Sbjct 334328 TCCAACCATAGAAGTGCATGCTGGTCAGTTTGCCATAGTTTGGCTCAGCAATATGGATAT 334387 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 | | ||| || || || || ||| |||| || | ||||| ||||| || | | |||| Sbjct 334388 TTAGAGACTGGCTCTGGTCAATGTAGGCACCGCGATCTGCCGCCATCTTGAGAACTGTCT 334447 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 53043 | || | |||||||| | |||||||| |||| |||| | ||| || || Sbjct 334448 TCTGGGAGATTTCCCAGACTGTTTTATACAACT-GCTTCAGATCATCGGG 334496 Score = 84.2 bits (92), Expect = 3e-11 Identities = 125/177 (71%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 53413 CTCAGCT---AGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTT 53469 ||||||| ||||||||||| ||||| | || |||| || ||||| || ||||||| Sbjct 335248 CTCAGCTGCCAGTTCACAACTGGCCTCCAGAGCGGCGTAGTAGATGGTCTCAAAGATCTG 335307 Query 53470 CTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTC 53529 | || || || || || |||| |||||||||||| | || || || || || Sbjct 335308 AATGTTGAGTAACTGGGCCTCTGGGCTTTCAAATGGATAACGCATAAGGATGAAGGCATC 335367 Query 53530 TGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGC 53586 || | ||| || ||||| || || || || || || | ||| ||||| ||||||| Sbjct 335368 AGCCAGTCCCTGCACACCGATTCCAATTGGCCTGTGACGCTTGTTAGAATTTTCAGC 335424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593495881890720