Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq251 163 3e-35 >seq251 Length=594084 Score = 163 bits (180), Expect = 3e-35 Identities = 144/180 (80%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || || | ||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct 586418 CTTGAGTCCTGTAATGTGTGCGATCATGTAGGTCAGAAGTGCGTAGCTGGCGATGTTGAA 586477 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 || || ||||| ||||| || || ||||||||||||||||| ||||| ||||| || | Sbjct 586478 AGGAACTCCCAGACCCATATCACCTGAGCGCTGGTACAGCTGACAGGACAGCTCACCATC 586537 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 ||||||||||| || ||| ||||||||| ||||| |||||| ||||||||| || Sbjct 586538 ACAGACGTAGAACTGACAGAGGGCGTGGCAGGGAGGCAGAGCCATGAGGGGCAGGTCTGC 586597 Score = 89.7 bits (98), Expect = 6e-13 Identities = 111/150 (74%), Gaps = 8/150 (5%) Strand=Plus/Plus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| | || || ||||| ||||||||||| || || || || |||||||| || ||| Sbjct 587602 GTACTCTGCACCAAAGTGTCTCCACTGGAAGCCATACACCGGTCCCAGGTCGCCCTCCTC 587661 Query 146100 CC----TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155 | |||| ||||| | | | ||||||||||||||||||||||| ||||||| Sbjct 587662 TCGCTCTGTGA---AGCCCAGATTGTCC-AGGAAGTCCCGGGACCCGTTGGCATCCCAGA 587717 Query 146156 TCTTGACGCCCCTCGCGGAGAGCTCATTGG 146185 |||| || || || | || ||||| |||| Sbjct 587718 TCTTCACCCCTTTCTCTGACAGCTCCTTGG 587747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589852467552560