Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq128 122 1e-22 seq60 91.5 2e-13 >seq128 Length=855465 Score = 122 bits (134), Expect = 1e-22 Identities = 183/256 (71%), Gaps = 8/256 (3%) Strand=Plus/Plus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 ||||||||| |||||||||||||||||||| | ||| || || |||| || |||| Sbjct 189218 GAACTTCTCAAAGTTCCAGGCCACGTCGTTCCTGCAGACCGGGCTCCAGATGATCAGCTT 189277 Query 83203 GGGGTCGCTCACGAGCGTGCTCATG--TCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGG 83260 ||||||||| | || | || ||| |||||||| || ||| ||| ||| | ||| Sbjct 189278 GGGGTCGCTGATTAGGG--CTGATGGGTCGTCGCTGGGGTACGGGAGGCTCTCCCTCAGG 189335 Query 83261 AAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAA 83318 || | || | |||| || |||| | | || || || |||||| | |||| || Sbjct 189336 AACACAAACAAGGGATCGGCGTCCTTTC--CATTCACATCCACCTTCTCAAGGAGCTGAA 189393 Query 83319 AGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCAT 83378 | || ||||| ||||| || ||||||||||||| |||||| || | | ||| || ||| Sbjct 189394 ACTTTGGCTCAAAGCCATTTCCAGGACGGACGTACTTCAGAGACAGGAGGATTTCTTCAT 189453 Query 83379 TCTGGGCGTTTTCCTG 83394 ||| | ||| ||||| Sbjct 189454 TCTTGCAGTTCTCCTG 189469 >seq60 Length=1067559 Score = 91.5 bits (100), Expect = 2e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 83138 ACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATG 83197 |||| |||||||||||||||||||| ||||||||| | |||||||||| ||| ||| Sbjct 959954 ACCAGGAACTTCTCGAAGTTCCAGGACACGTCGTTTCTGCACACTGGACTCCAAATGATG 959895 Query 83198 AGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGT 83257 |||| || || ||| ||| | | |||| || || || |||| || |||| Sbjct 959894 AGCTTTGGATCAGTCATGAGAGCCGTGGTGTCATCACTGGGGACCGGGAGCTTCTCTTTC 959835 Query 83258 AGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATA 83317 || || | || || || || || | || || || || |||||| | ||| Sbjct 959834 AGATAGACAAACAGGGGGTGGGCATCTTTTCCATTCACATCCACCTTCTCCAGGAGTTGG 959775 Query 83318 AAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCA 83357 || || || || || || ||||| |||||||||| ||||| Sbjct 959774 AACTTTGGTTCAAAACCATTCCCTGGACGGACGTACTTCA 959735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608565350676560