Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1673 132 4e-26 seq365 113 4e-20 SEQ16359 100 2e-16 >seq1673 Length=142529 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 |||||| || || || | ||||||| || | ||||||||||| || ||||| ||||| Sbjct 270 GTTTCCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 211 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | |||||| || | || |||||||| || || ||| | || || ||||||||||| Sbjct 210 AGACAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGG 151 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | |||||| ||||| ||||||| |||||| | | | || || | |||||| Sbjct 150 AGGGATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTC 91 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | |||| ||| ||||||||||| || | || || ||||| || ||||| Sbjct 90 CACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 40 >seq365 Length=500478 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| ||||| || ||||| ||||| | ||||| || | || |||||||| ||||| Sbjct 3837 GTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 3896 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || | ||||||||||| ||| | ||| |||||||| |||||| || Sbjct 3897 GCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTG 3956 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || |||| ||||||| |||| ||| |||||||| || || | || Sbjct 3957 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTGAGTGTC 4016 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 4017 TTGACAAAGATCTGCAT 4033 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| ||||| || ||||| ||||| | ||||| || ||||||||||||| ||||| Sbjct 8962 GTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCA 9021 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || | |||||||| || ||| | |||||| ||||| |||||| |||| Sbjct 9022 GCGAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCCTGGATCTTAGCTTTC 9081 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || |||| |||||| |||| ||| ||||| || || || | || Sbjct 9082 ACGTTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTTTTACCAGTGAGTGTC 9141 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 9142 TTGACGAAGATCTGCAT 9158 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| || ||||| ||||| ||||| | ||||| || | || |||||||| || || Sbjct 4124 GTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTTCCA 4183 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || | ||||||||||| || | |||||||||||| |||||| |||| Sbjct 4184 GCGAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTC 4243 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | || |||| |||||| || | ||| ||||| || || || | || Sbjct 4244 ACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTGAGTGTC 4303 Query 21159 TTGACAAATATTTGCATTTT 21178 ||||| || || ||||| || Sbjct 4304 TTGACGAAGATCTGCATGTT 4323 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| ||||| || ||||| ||||| | ||||| || |||| |||||||| ||||| Sbjct 9190 GTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCTTCCAGCTGCTTGCCA 9249 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 ||| | || | ||||||||||| ||| | |||||| ||||| |||||| Sbjct 9250 GCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCTT 9302 >SEQ16359 Length=2539 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20953 CTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGG 21012 ||| ||| | ||||||| || | ||||||||||| || ||||| ||||| | |||| Sbjct 2539 CTCTCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGG 2480 Query 21013 TTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGC 21072 | | | || || ||||| || || ||| | || || | |||||||| || | || Sbjct 2479 TGCGACCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGC 2420 Query 21073 CTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCA 21132 |||| ||||| ||||||| |||||| | ||| || || | ||||||| |||| Sbjct 2419 CTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCA 2360 Query 21133 CGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 ||| || || || || || | || || ||||| || ||||| |||| Sbjct 2359 GGGTGATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCATCTTGA 2312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422102680918424