Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq49 129 5e-25 seq365 89.7 4e-13 seq670 82.4 7e-11 >seq49 Length=1117640 Score = 129 bits (142), Expect = 5e-25 Identities = 487/749 (65%), Gaps = 30/749 (4%) Strand=Plus/Minus Query 133207 CTTTGACGAGATACTGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATA 133266 |||||| |||| ||||||| | |||||||| || | ||||| | | | || | Sbjct 732433 CTTTGAGCAGATGAGGGTTGACGATCTGAAACTCTCCCGACAGAACCCTGCGGGTGTAGA 732374 Query 133267 CATTCGACGTGAACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCG 133326 || ||| | | ||||| || ||||||||||| || ||||| || || | || | Sbjct 732373 TGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCTG 732314 Query 133327 TGGGCATGTACGCCACCAACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCA 133386 ||||||| |||| || || ||| || ||||| | ||| || || || || Sbjct 732313 TGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATTTTCTCCTTCA 732254 Query 133387 ATTCGTTCCAGTCCCACAGATTGTTGGAATGATAGACGCCGTTCTCGTCGTCGTAGTTGT 133446 ||||||||||| |||| | | | || | ||||| | | | || || Sbjct 732253 GCAGCTTCCAGTCCCAGAGATCGGTCGG--------CGTC-TTCTC--CCACAT-GTCGT 732206 Query 133447 GAAAATGCAAAATACCCCTGCTCACCGGACTGTCCGTGTACGATTCATAGGGTCCGTTGA 133506 | |||| || ||| |||| ||||| | || ||||| || ||||| ||| | Sbjct 732205 ---ACTGCAGGATGCCCTTGCTGACCGGGGAGCCCTCGTACGTCTCGTAGGGGCCG---A 732152 Query 133507 TTTTGGCC---AGCTCGCAGCTAGCCTCCAAAGCGGCAAAGTAAATGGTTTCCGCGAT-T 133562 | |||| ||||||||||| ||||||| |||||| ||||||||||||| ||| | Sbjct 732151 GCTCGGCCGCCAGCTCGCAGCTCGCCTCCAGAGCGGCGTAGTAAATGGTTTCGAAGATGT 732092 Query 133563 GAATAGTTGACGAACCTG-GCATCGTCGCTATCGTAGGCGATGTCG-AGAAGAACAAACG 133620 | || ||||| | | || || || ||| || | | | || || | |||| || | Sbjct 732091 GGAT-GTTGA-GCAGTTGAGCCTCTGGGCTTTCAAACGGG-TGACGCATGAGAATGAAGG 732035 Query 133621 CGTCGGCCAAACCCTGTATGCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTCTCCG 133680 ||||||| |||||||| | |||| ||||| || | || || || |||| | Sbjct 732034 CGTCGGCTAAACCCTGGACTCCGATTCCGATCGGCCTGTGGCGCTTGTTCGAGTTCTCGG 731975 Query 133681 ACTCGGCCGTGGGATAGTGGTTGACGTCGATGATCTTGTTGAGATTGCGGACGATAATTT 133740 || | || |||| ||||| ||||| |||||||| || || |||||| | || Sbjct 731974 CTTCCGGTACCGGGTAGTAGTTGATCTCGATAATCTTGTTCAGGTTTTTGACGATTACTT 731915 Query 133741 TAGTCAAATGTTTCAGCAAAACATAGTCAAATGTCTTGGCGTCGACGTCGACGCACTTGT 133800 | |||| || | ||| | | ||||| ||| || | || |||| || ||| Sbjct 731914 TGGTCACATATGCCAGTTTCTTAAAATCAAAAGTCC--GCTCTGGGGT-GACGTACATGT 731858 Query 133801 TGACGGCAATACTGGCTAGATTACAAACGGCCGTCTCGTTCTCGTCGCAATACTGGACGA 133860 ||| ||| || ||| || ||||| || || ||||| || | | || | || | Sbjct 731857 TGAGGGCGATGGAGGCCAGGTTACAGACCGCTACCTCGTCCTTGCTGGTGTATTCAACAA 731798 Query 133861 TCTCGGCGCAGAGGTTGCTGCATTTGATGGTGCCCAAAtttttttGATTGCTAAAGTTAT 133920 | |||| ||| ||||||||||| || |||||||||| ||| | || ||||| | | Sbjct 731797 TTTCGGTGCACAGGTTGCTGCACTTTATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGT 731738 Query 133921 TGCAATGATCCTTGTATAGCATGTACGGC 133949 |||| || ||||| |||||||| ||| Sbjct 731737 TGCAGGCGTCTTTGTACAGCATGTATGGC 731709 >seq365 Length=500478 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| | ||||| || || || || || |||||||| || | ||||| ||| Sbjct 3821 CAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3880 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || ||||| || ||||| |||| | | |||||| || || || |||||||||||||| Sbjct 3881 TTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTC 3940 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | |||| |||||| || ||| ||||| | ||| | || Sbjct 3941 CTGGATCTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 4000 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || || ||||| ||||||||| Sbjct 4001 CTTACCAGTGAGTGTCTTGACAAAGATCTGCATG 4034 >seq670 Length=351828 Score = 82.4 bits (90), Expect = 7e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608 ||||||| |||||||| ||| || ||||| |||||| |||||||||||||| ||| Sbjct 242414 CTTTTTGGATGTTGTAGTCGGACAGTGTGCGTCCATCCTCCAGCTGTTTTCCAGCAAAGA 242355 Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCC 118636 | |||||||||||||| || || || || Sbjct 242354 TCAGACGCTGCTGATCAGGGGGAATTCC 242327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433669591814488