Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1673 123 3e-23 SEQ16359 120 3e-22 seq3796 102 9e-17 seq365 100 3e-16 seq744 98.7 1e-15 seq993 95.1 1e-14 seq915 93.3 5e-14 seq2115 91.5 2e-13 seq510 91.5 2e-13 seq160 89.7 6e-13 seq2908 86.0 7e-12 seq3624 82.4 9e-11 >seq1673 Length=142529 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| | | ||||| ||||| || | ||| |||||| || || ||||| |||| Sbjct 267 TCCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 208 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||| || || | || || |||||||||||||| || || || | ||||||||| | || Sbjct 207 CAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAGG 148 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || || ||||| ||| ||| ||| | || | | |||||||| | ||||| Sbjct 147 GATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCAC 88 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 87 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 40 >SEQ16359 Length=2539 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 42961 CTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAG 43020 |||| | ||||| ||||| || | ||| |||||| || || ||||| || | || | Sbjct 2539 CTCTCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGG 2480 Query 43021 TCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGC 43080 | || | || ||||||||||||||||| || || || || |||||||| | || | || Sbjct 2479 TGCGACCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGC 2420 Query 43081 TCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGA 43140 || |||||| ||| ||| ||| | || | | |||||||| | ||||| || | Sbjct 2419 CTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCA 2360 Query 43141 CCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189 ||||| ||||| || || || ||||| |||||||| ||||| || || Sbjct 2359 GGGTGATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCATCTTGAC 2311 >seq3796 Length=36161 Score = 102 bits (112), Expect = 9e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 28251 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 28192 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 28191 TATACTAACGAGGA 28178 >seq365 Length=500478 Score = 100 bits (110), Expect = 3e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || ||||| || ||||| |||| || || || | || || |||||||| |||||||| Sbjct 4130 TCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCGAAG 4189 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | | ||||||||| | || | || ||||||||| ||| || ||| | || Sbjct 4190 ATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTC 4249 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| || | || || |||| ||||||||||| || || || ||||| || Sbjct 4250 TCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTGAGTGTCTTGACG 4309 Query 43173 AAGATTTGCATTTTT 43187 ||||| ||||| ||| Sbjct 4310 AAGATCTGCATGTTT 4324 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| |||| || || || |||| || |||||||| |||||||| Sbjct 8968 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAG 9027 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | | |||||| || | || | || || |||||| ||| || ||| | || Sbjct 9028 ATCAACCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCCTGGATCTTAGCTTTCACGTTC 9087 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| || | || || || | ||||||||||| || || || ||||| || Sbjct 9088 TCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTTTTACCAGTGAGTGTCTTGACG 9147 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 9148 AAGATCTGCAT 9158 >seq744 Length=314959 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 249949 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 249890 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 249889 TACTAACGAGGA 249878 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| |||| || | ||||||||||||| ||||||||||||||||||||| |||| Sbjct 242602 AAAAATAACCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 242543 Query 60117 TCACCACTATA 60127 ||||||||||| Sbjct 242542 TCACCACTATA 242532 >seq993 Length=254094 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 147964 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 147905 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 147904 TACTAACGAGGA 147893 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 158411 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 158352 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 158351 TACTAACGAGGA 158340 >seq915 Length=266871 Score = 93.3 bits (102), Expect = 5e-14 Identities = 71/83 (86%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 60057 AAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 ||| ||||| |||| || | ||||||||||||| ||||| |||||||||||||||| || Sbjct 78371 AAATATTTTTACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGAT 78312 Query 60115 ACTCACCACTATACTACCGAGGA 60137 ||| ||||||||||| |||||| Sbjct 78311 ACTGTCCACTATACTAACGAGGA 78289 >seq2115 Length=101419 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 60060 AATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCA 60119 || || |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| Sbjct 21477 AAATTACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGT 21418 Query 60120 CCACTATACTACCGAGGA 60137 ||||||||||| |||||| Sbjct 21417 CCACTATACTAACGAGGA 21400 >seq510 Length=807390 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||||||||| || || || || |||||||| | || | || || |||||| | Sbjct 1575 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 1634 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || ||| ||| | || | | |||||||| | ||||| || | ||||| ||||| Sbjct 1635 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 1694 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189 || || || ||||| |||||||| ||||| || || Sbjct 1695 CCAGTCAGGGTCTTCACAAAGATCTGCATCTTGAC 1729 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||||||||| || || || || |||||||| | || | || || |||||| | Sbjct 4235 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 4294 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || ||| ||| | || | | |||||||| | ||||| || | ||||| ||||| Sbjct 4295 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 4354 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189 || || || ||||| |||||||| ||||| || || Sbjct 4355 CCAGTCAGGGTCTTCACAAAGATCTGCATCTTGAC 4389 >seq160 Length=713727 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 552129 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 552070 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 552069 TACTAACGAGGA 552058 >seq2908 Length=60829 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/79 (85%), Gaps = 2/79 (3%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||| ||||||||| ||||| |||||| Sbjct 38062 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTAACAGGCGGAGATACTGTCCACTA 38121 Query 60126 TACTACCGAGGA--TTGAA 60142 ||||| |||||| ||||| Sbjct 38122 TACTAACGAGGAAGTTGAA 38140 >seq3624 Length=62757 Score = 82.4 bits (90), Expect = 9e-11 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCT----CCCGCGTGACAGGCGGACATACTCACC 60121 |||| || | ||||||| ||||| ||||| |||||||||||||||| ||||||||| Sbjct 60311 CTCCCCGTCGGGGAATCAAACCCCGGTCTGGCCCCCGCGTGACAGGCGGGGATACTCACC 60370 Query 60122 ACTATACTACCGAGGA 60137 ||||||||| |||||| Sbjct 60371 ACTATACTAACGAGGA 60386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571600209243920