Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq7 329 2e-85 seq2305 104 2e-17 >seq7 Length=1729193 Score = 329 bits (364), Expect = 2e-85 Identities = 612/887 (69%), Gaps = 10/887 (1%) Strand=Plus/Plus Query 107691 CTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATT 107750 || ||| |||| ||| | |||| |||||||| ||||| ||||||||||||||||||||| Sbjct 1184325 CTCAGTGAAGAGGAGGAAAACTTTCCCATTGCGTACTCAATGGTGGTCCATGAGAAGATT 1184384 Query 107751 GAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCAC 107810 | | |||||||| || || ||||| ||||| || ||||||||||| ||||| || || Sbjct 1184385 AACATGTTTGAACGACTTCTCCGAGCTGTGTACGCTCCTCAGAACATCTACTGCGTACAT 1184444 Query 107811 GTGGATGTGAAGTCCCCAG-AGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTT 107869 ||||| ||| ||| | | ||||||||| | | || || | |||||| |||| ||||| Sbjct 1184445 GTGGACAGGAAATCCTCTGAAGACTTTCAGA-AAGCTGTGGATGCCATTGTTTCATGCTT 1184503 Query 107870 CCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGT 107929 || ||||| || | ||||||||||||| |||||| || || || ||||||||||| Sbjct 1184504 TCCTAATGTGTTTGTAGCCAGTAAGTTGGAAAGGGTGGTGTACGCTTCATGGTCCAGAGT 1184563 Query 107930 GCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTT 107989 ||| ||||| |||||||| ||| | || | || || || | |||| |||| | Sbjct 1184564 GCAGGCTGATCTGAACTGCATGAAGGATCTACTGAAGTCACCAATAGACTGGAGGTACCT 1184623 Query 107990 ACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCT 108049 ||||| || || ||||||||||||||||| || || |||| |||||||| | || Sbjct 1184624 GCTGAACACCTGTGGGACAGACTTCCCCATCAAAACAAATGGAGAGATGGTGAAAACACT 1184683 Query 108050 CAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGT-ACCTTCTGAGTCCaaaaaaa 108108 ||| | || || |||||||| |||||| |||||| ||| | | | ||| ||| Sbjct 1184684 GAAGGCCCTCAATGGAAAGAACAGCATGGAGAGTGAGGTGACCAAC-AACTACAAGAAAG 1184742 Query 108109 aTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAGG 108168 |||||| | || | ||| | || || ||||| | ||| | ||| Sbjct 1184743 CCCGCTGGCAGTATCACTACAACGTCACGGACACGGTCATAAATACATATGTGGCGAAAA 1184802 Query 108169 ACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAG 108228 ||| || || | ||||||||||| || |||||||| ||||||| | ||| Sbjct 1184803 GCCCCCCGCCCATCAGCAGCCCCATGTTCACTGGAAATGCCTACTTTGTGGTTACAAGAG 1184862 Query 108229 CCTTTGTCCAACATGTCTTAGACAAC-CCTAAATCCCAAAGACTGGTTGAATGGGTCAAA 108287 |||||||| | ||||| ||||| || | || | ||| | | || |||| || Sbjct 1184863 CCTTTGTCAAGCATGTGTTAGAGGACAGAGATATTCAGAAG-TTCCTGGAGTGGGAGAAG 1184921 Query 108288 GACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCT 108347 ||||| || |||||||| || ||||| |||||||| || ||| | || | | ||| Sbjct 1184922 GACACGTACAGCCCCGATGAGCACCTGTGGGCCACTCTACAGAGGATGCCTTCAGTTCCT 1184981 Query 108348 GGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTC 108407 || || || || || ||||||| | | ||||||||| |||| |||| | | Sbjct 1184982 GGGTCAGTACCCTCTAACATCAAGTATGATACGTCAGACATGCATGCCTTCGCTCGTGTG 1185041 Query 108408 GTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTG-CTC 108466 ||||||||| |||| || |||||||| || | || || || || || || | | Sbjct 1185042 GTCAAGTGGAGCTACCTGGAAGGAGATGTGAGAAACGGAGCCCCCTACTACCCATGTCAC 1185101 Query 108467 TG-GAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCC 108525 | | |||| |||| || | ||| | || || | || ||||| ||| | || Sbjct 1185102 GGTGTTTCCA--GGAGAGCTGTGTGCGTCTATGGAGTTGGAGACCTCCGGTGGGTCCTGA 1185159 Query 108526 AGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGAT 108572 | | |||||||| ||||||| |||||||| || ||| |||||| Sbjct 1185160 ATCAACATCACCTTCTGGCAAATAAGTTTGATCCTGAGGTTGATGAT 1185206 >seq2305 Length=176755 Score = 104 bits (114), Expect = 2e-17 Identities = 145/202 (72%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 107754 AACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTG 107813 || ||||| || || |||||||| | ||||| ||||| || || || |||||||| ||| Sbjct 168606 AATTTTGAGCGACTACTGCGAGCTATTTATGCACCTCAAAATATTTATTGTGTCCATGTG 168547 Query 107814 GATGTGAAGTCCCCAGAGACTT---TCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTC 107870 || || || ||||| | || | || ||| |||||| | ||||| ||| Sbjct 168546 GACAAAAAATC---AGAGAGCTCAGTCTTTGCTGCCATCATGGCCATCACCTCCTGTTTC 168490 Query 107871 CCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTG 107930 || ||||||||||||| ||| | ||| ||||| ||||| ||||||| |||| Sbjct 168489 CCAAATGTCTTCATGGTCAGACGGCCTGTCAGTGTGGTCTATGCAGCCTGGTCACGAGTC 168430 Query 107931 CAAGCTGACCTGAACTGTATGG 107952 || |||||||| |||||||||| Sbjct 168429 CAGGCTGACCTTAACTGTATGG 168408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348139706986236