Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq49 104 5e-17 >seq49 Length=1117640 Score = 104 bits (114), Expect = 5e-17 Identities = 395/614 (64%), Gaps = 11/614 (2%) Strand=Plus/Plus Query 248799 CTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCT 248858 ||||| | |||||| ||| | ||||| | ||||| || |||||| ||||| || Sbjct 730911 CTACGACCGAGATTTCTCCTACAACTTCTTCGGCTTCAAGACTCTGGAGCGTTCGTACCT 730970 Query 248859 CCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGT 248918 || || || | ||||| | | || ||| ||||||||| | ||| |||| |||| Sbjct 730971 GCTGAAGATCAACGGCAAAGTGGCCGAGCGACCGCAGCACATGCTCATGAGAGTCTCTGT 731030 Query 248919 CGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATG--AGTGAA 248976 || || |||||| || || || | | | ||||| |||| | || || ||| Sbjct 731031 AGGAATCCACAAGACGGATATCGATGCAGCGATTGAGACCTACAACCTGCTGTCAGAGAA 731090 Query 248977 CGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTG 249036 ||| | || || ||| | ||||| ||||||||||| || ||| || ||||||| Sbjct 731091 G--TGGTTCACCCACGCCTCCCCGACTCTCTTCAACGCTGGGACCAACAGGCCTCAGCTG 731148 Query 249037 AGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTT 249096 | ||||| || || |||||| | |||||| | || ||||| || |||||||| Sbjct 731149 TCCAGCTGCTTCCTGCTCGCCATGAAGGACGACAGCATTGAAGGCATCTACGACACGCTG 731208 Query 249097 AAACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATC 249156 || ||| || || || || | || || || |||||| | | ||| | |||| Sbjct 731209 AAGCAGTGTGCCCTCATCTCCAAGTCAGCTGGAGGCATCGGTGTGGCGGTCAGCTGCATC 731268 Query 249157 CGAGCGA-AGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCT 249215 || | | |||| | |||||| || || || || | | || |||| ||| | Sbjct 731269 AGATCTACAGGGAGC-TACATCTCTGGCACCAACGGAAACTCCAACGGGCTCGTCCCCAT 731327 Query 249216 CCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGCCGAAAG----G 249271 || || | | ||| || | | | || |||||| |||| | | || | Sbjct 731328 GCTGAGAGTTTACAACAACACGGCACGCTACGTCGACCAGG-GGGGCAACAAGAGACCCG 731386 Query 249272 GGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGA 249331 | | ||||||||||| | || |||||| || | || || |||||||| ||| Sbjct 731387 GAGCCTTCGCCATGTACCTAGAGCCCTGGCACTTTGACGTGTTCGACTTCCTGGAGCTGA 731446 Query 249332 AAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCT 249391 | ||||||| || || ||| ||| || | ||||| ||||||| | ||||| || Sbjct 731447 AGAAGAACACAGGAAAGGAGGAGCAGAGGGCCAGAGACCTTTTCTACGCCATGTGGATCC 731506 Query 249392 CCGACTTGTTCATG 249405 | || |||||||| Sbjct 731507 CTGATCTGTTCATG 731520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073347975380352