Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq251 120 3e-22 >seq251 Length=594084 Score = 120 bits (132), Expect = 3e-22 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || || | ||| ||||||| || ||||| || ||||||||||||||||| || || Sbjct 586422 AGTCCTGTAATGTGTGCGATCATGTAGGTCAGAAGTGCGTAGCTGGCGATGTTGAAAGGA 586481 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || || ||||| || | || | |||||||||||| ||||||||||| || | Sbjct 586482 ACTCCCAGACCCATATCACCTGAGCGCTGGTACAGCTGACAGGACAGCTCACCATCACAG 586541 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151 ||||| |||||||| | |||| || ||||| |||||||| Sbjct 586542 ACGTAGAACTGACAGAGGGCGTGGCAGGGAGGCAGAGCCAT 586582 Score = 86.0 bits (94), Expect = 5e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 21280 TGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGC 21339 ||||||| || ||||| |||||||||||||| || |||||||| ||||| |||||||| Sbjct 587601 TGTACTCTGCACCAAAGTGTCTCCACTGGAAGCCATACACCGGTCCCAGGTCGCCCTCCT 587660 Query 21340 GGCGGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTT 21399 || || ||||||| | ||| ||| | |||||||||| || ||||| || | Sbjct 587661 CTCGCTCTGTGAAGCCCAGATTGTCCAGGAAGTCCCGGGACCCGTTGGCATCCCAGATCT 587720 Query 21400 TTACGCC 21406 | || || Sbjct 587721 TCACCCC 587727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427617436002720