Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq49 529 3e-145 seq277 111 2e-19 seq56 102 1e-16 >seq49 Length=1117640 Score = 529 bits (586), Expect = 3e-145 Identities = 1332/1997 (67%), Gaps = 33/1997 (2%) Strand=Plus/Minus Query 78966 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCT 79025 |||||||||||| | || || | | ||||| ||||| || ||||| | | ||| Sbjct 732504 CTGAATGGATCCGTTGTGAGCGATCAGCTGGTTCTTCATCTCCTCGTTCCACAGTCCTCT 732445 Query 79026 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 79085 ||| || | || | || ||||| || || || | ||||| ||||| |||| || || Sbjct 732444 CTCCGTCAGGTCTTTGAGCAGATGAGGGTTGACGATCTGAAACTCTCCCGACAGAACCCT 732385 Query 79086 CCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGC 79145 || ||||| || || ||||| || | ||| | || || || || |||| || || || Sbjct 732384 GCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGC 732325 Query 79146 AGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGAT 79205 || || || || ||||| || |||| || | || || || | || | | ||| Sbjct 732324 GGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGAT 732265 Query 79206 TTTATCTTTTAG-AGATTCCCAATCCCAAAGATCAGACGG-GACAACATTCCAAAGATCA 79263 ||| || || || || |||| | ||||| ||||| | ||| | | | | ||| | || Sbjct 732264 TTTCTCCTTCAGCAGCTTCC-AGTCCCAGAGATCGGTCGGCGTCTTC-TCCCACATGTCG 732207 Query 79264 TATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTT 79323 || || || || || || || | || || ||| || || || || || || Sbjct 732206 TACTGCAGGATGCCCTTGCTGACCGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCG 732147 Query 79324 TCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTA 79383 | || | || || |||||||| | || |||| |||||||||||||| || | | Sbjct 732146 GCCGCCAGCTCGCAGCTCGCCTCCAGAGCGGCGTAGTAAATGGTTTCGAAGATGTGGATG 732087 Query 79384 TTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 79443 ||||| ||| || ||| |||| ||||| || | | | |||||| || ||||| ||| Sbjct 732086 TTGAGCAGTTGAGCCTCTGGGCTTTCAAACGGGTGACGCATGAGAATGAAGGCGTCGGCT 732027 Query 79444 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGA 79503 || || || || || || ||||| || || || | ||| || || | || ||||| || Sbjct 732026 AAACCCTGGACTCCGATTCCGATCGGCCTGTGGCGCTTGTTCGAGTTCTCGGCTTCCGGT 731967 Query 79504 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACA 79563 | || || || || || || ||||| || || || || |||| ||||||||| |||| Sbjct 731966 ACCGGGTAGTAGTTGATCTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTCACA 731907 Query 79564 TCCTTTAGTTTGAGAAAATCAAATCGTCC-ATCT---ATTACAAACATGTTCAACGCGAC 79619 | ||||| ||||||||| |||| ||| | || ||||||| | |||| Sbjct 731906 TATGCCAGTTTCTTAAAATCAAA-AGTCCGCTCTGGGGTGACGTACATGTTGAGGGCGAT 731848 Query 79620 AGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATTTCAGTG 79677 || ||||| ||||| || |||||||| | | || | |||| | ||||| ||| Sbjct 731847 GGAGGCCAGGTTACAGACCGCTACCTCGTCCTTGC--TGGTGTATTCAACAATTTCGGTG 731790 Query 79678 CAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 79737 || ||||| || ||||| ||||| || | ||| || || || ||||| |||| || || Sbjct 731789 CACAGGTTGCTGCACTTTATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCG 731730 Query 79738 TCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAG 79797 || || || || ||| | || || ||||| || |||| || || || || || | ||| Sbjct 731729 TCTTTGTACAGCATGTATGGCGTTCCAGTCTCTGTCTGCGACTCAATGATGGCGTACCAC 731670 Query 79798 A-CGACTCGAGCCTTTATTATAGACTTG---TATCTCT-TTTCTCTTTCGTATTGTGTAT 79852 | | || ||||||| | | | |||| | | || ||||| | | | ||||| Sbjct 731669 AGCTGCT-GAGCCTTCACCACACGCTTGGCCTTGCCCTCCTTCTCATAC--CTGGTGTAG 731613 Query 79853 ATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACA 79912 | || || ||||| || ||||| || || | ||||| || ||| ||||||| Sbjct 731612 AGCTTC--TCAAACTCCTCCCCCCAGCACTCATCCAGACCAGGGCAGGCGTTGGGACACA 731555 Query 79913 TCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 79972 ||| ||||| || | || |||| ||||| || |||||||| ||||| | | Sbjct 731554 TCAGAGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACAGATCAGGGATCCACATGG 731495 Query 79973 C-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 80031 | || ||| || ||||||| || |||||||| |||||||| ||||| || || || ||| Sbjct 731494 CGTAGAAA-AGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGG 731436 Query 80032 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTG 80091 || | | | ||| | ||||| || || | ||| ||||| | |||| |||| ||| Sbjct 731435 AAGTCGAACACGTCAAAGTGCCAGGGCTCTAGGTACATGGCGAAGGCTCCGGGTCTCTTG 731376 Query 80092 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 80151 || || ||||| || | ||| | || ||||| || |||||||||| ||| || | | Sbjct 731375 TTGCCCCCCTGGTCGACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGC 731316 Query 80152 CCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATT 80211 || ||||| | || ||||| || ||||| ||||| || | | | || || | Sbjct 731315 CCGTTGGAGTTTCCGTTGGTGCCAGAGATGTAGCTCCCTGTAGATCTGATGCAGCTGACC 731256 Query 80212 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 80271 | | ||| || || || || || ||||| | || || | || | ||| || ||| Sbjct 731255 GCCACACCGATGCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCGTAG 731196 Query 80272 ATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 80331 ||||| || ||||| || || ||||| || || || ||||| |||| || | | Sbjct 731195 ATGCCTTCAATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTG 731136 Query 80332 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 80391 | || || || || || | || || || ||||| || ||||| || || ||||| || Sbjct 731135 TTGGTCCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGG 731076 Query 80392 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATT 80451 ||||| |||||||| |||| || |||||| | || |||||||| | ||| | ||| Sbjct 731075 TTGTAGGTCTCAATCGCTGCATCGATATCCGTCTTGTGGATTCCTACAGAGACTCTCATG 731016 Query 80452 AACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCC 80511 | ||||||||| |||| || | | ||| || || |||| || ||| || ||| Sbjct 731015 AGCATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTACGAACGCTCC 730956 Query 80512 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 80571 | ||| || || || || ||||||| || || ||||| ||||| || || ||||||| Sbjct 730955 AGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAATCTCGGTCGTAGATTATGGACGAGTTG 730896 Query 80572 AGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT-GAAATAATCGGAGAATG 80630 ||| || || | || ||| | || | || | ||| || || || || || | Sbjct 730895 AGTCGGTCTTTGTTTTCTAGAACGATGTCAAGCGT-CTCCTTGGAGATCATAGGTGA--G 730839 Query 80631 TTTCCCATTTTTA--GGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGt 80688 | | | || | || || | |||||| | | ||||||||||| || || || | | Sbjct 730838 TGGCGTTTGTTCAGGGGGTTGATGTAGTTGTACAGGTCCTCCATCACGTCGCTGAACACT 730779 Query 80689 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCT 80748 || || || || ||||| || || || ||||| || | || || | ||||| || || Sbjct 730778 TTCTTAGTCTCTTTGTGCAGGTTGGAGACGGCGATCCGAGCAGCGAGGATGGCGTAGTCG 730719 Query 80749 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 80808 || |||| || || ||||| || || || |||||||| ||||| | || || || Sbjct 730718 GGGTGTTTAGTTGTGAGCGTGGCAGCGATCTCTGCTGCCAGCGTGTCGAGCTCCACAGTG 730659 Query 80809 GTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGA 80868 || ||||| | || | || ||||| |||||||| | || | || || | | Sbjct 730658 GTGACTCCGCTGTACAGACCCTGGATCACCTTCATGGTGATCTGGGCCGGGTCCACAAAG 730599 Query 80869 TCAGTGTTTAAGCCATAACATAATTTTCT-AATACGAGACGTGATTTTATCAAACATGAC 80927 |||| ||| | || || || || |||| || ||||| |||||||| || |||||||| Sbjct 730598 TCAGAGTTCAGCCCGTAGCA-AAGCTTCTGGATGCGAGAGGTGATTTTGTCGAACATGAC 730540 Query 80928 ATTTTCCTTGTATCCAT 80944 ||||| | ||||| Sbjct 730539 GCGTTCCTGGCGTCCAT 730523 >seq277 Length=566994 Score = 111 bits (122), Expect = 2e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||||||||| || || || |||||||| || || || |||||||| ||||| | ||| | Sbjct 257392 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 257333 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| || |||| || || || ||||| ||||||||||| || || || || |||| Sbjct 257332 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 257273 Query 50102 CAACAAGTCTCTCTCC 50117 | |||| | |||||| Sbjct 257272 CCACAACACGCTCTCC 257257 Score = 111 bits (122), Expect = 2e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||||||||| || || || |||||||| || || || |||||||| ||||| | ||| | Sbjct 272204 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 272263 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| || |||| || || || ||||| ||||||||||| || || || || |||| Sbjct 272264 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 272323 Query 50102 CAACAAGTCTCTCTCC 50117 | |||| | |||||| Sbjct 272324 CCACAACACGCTCTCC 272339 >seq56 Length=1093683 Score = 102 bits (112), Expect = 1e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 79291 GATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAAT 79350 || || | ||| ||||||||||| || ||| | || | ||||||||| ||||| | Sbjct 335219 GAGCCAGCGTAGGTTTCATAAGGGCCGACCTCAGCTGCCAGTTCACAACTGGCCTCCAGA 335278 Query 79351 GCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCA 79410 || |||| || ||||| || || |||| | ||||| || || ||| |||| ||| Sbjct 335279 GCGGCGTAGTAGATGGTCTCAAAGATCTGAATGTTGAGTAACTGGGCCTCTGGGCTTTCA 335338 Query 79411 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 79470 ||||||||| | || || || || || || | ||| || ||||| || || || || Sbjct 335339 AATGGATAACGCATAAGGATGAAGGCATCAGCCAGTCCCTGCACACCGATTCCAATTGGC 335398 Query 79471 CTATGTCTCTTATTAGAAATTTCAGC 79496 || || | ||| |||||| ||||||| Sbjct 335399 CTGTGACGCTTGTTAGAATTTTCAGC 335424 Score = 93.3 bits (102), Expect = 6e-14 Identities = 124/170 (73%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| || ||||| ||||| || || |||||| ||| | || || || |||||||||| Sbjct 334328 TCCAACCATAGAAGTGCATGCTGGTCAGTTTGCCATAGTTTGGCTCAGCAATATGGATAT 334387 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 | | ||| || || || || ||| |||| || | ||||| ||||| || | | |||| Sbjct 334388 TTAGAGACTGGCTCTGGTCAATGTAGGCACCGCGATCTGCCGCCATCTTGAGAACTGTCT 334447 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 78953 | || | |||||||| | |||||||| |||| |||| | ||| || || Sbjct 334448 TCTGGGAGATTTCCCAGACTGTTTTATACAACT-GCTTCAGATCATCGGG 334496 Score = 93.3 bits (102), Expect = 6e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 80678 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAA 80737 |||| || | ||| || ||||| ||||| || || || || || || | || || | | Sbjct 338076 CACTGAACACTTTCTTGGTTTCTTTGTGCAGGTTAGAAACTGCGATCCGTGCAGCCAGGA 338135 Query 80738 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 80797 | ||||| || ||||||| || || ||||| ||| | || |||||||||||||||| Sbjct 338136 TTGCATAGTCAGGATGTTTAGTGGTGAGGGTGGCCGCTGTCTCTGCTGCCAGAGTGTCCA 338195 Query 80798 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 80843 || || || || |||||| | || | || ||||| |||||||| Sbjct 338196 GCTCCACAGTGGTGACTCCACTGTACAGACCCTGGATCACCTTCAT 338241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717995732158960