Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017-
04-25] 30,414 sequences; 991,584,656 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq49 509 2e-139
seq56 102 1e-16
seq277 93.3 6e-14
>seq49
Length=1117640
Score = 509 bits (564), Expect = 2e-139
Identities = 1323/1997 (66%), Gaps = 33/1997 (2%)
Strand=Plus/Minus
Query 71049 CTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCT 71108
|||||||||||| | || || | | || || ||||| || ||||| | | |||
Sbjct 732504 CTGAATGGATCCGTTGTGAGCGATCAGCTGGTTCTTCATCTCCTCGTTCCACAGTCCTCT 732445
Query 71109 CTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCT 71168
||| || | || | || |||||||| || || | ||||| ||||| |||| || ||
Sbjct 732444 CTCCGTCAGGTCTTTGAGCAGATGAGGGTTGACGATCTGAAACTCTCCCGACAGAACCCT 732385
Query 71169 ACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGC 71228
|| ||||| || || ||||| || | ||| | ||||| || || |||| || || ||
Sbjct 732384 GCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGC 732325
Query 71229 AGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGAT 71288
|| || || || ||||| || |||| || || || || || | |||||| |||
Sbjct 732324 GGTGGAGGCTGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGAT 732265
Query 71289 TTTATCTTTTAG-AGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNN 71347
||| || || || || |||| | | ||| ||||| | ||
Sbjct 732264 TTTCTCCTTCAGCAGCTTCC-AGTCCCAGAGATCGGTCGGCGTCTTCTCCCACATGTCGT 732206
Query 71348 NNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTT 71407
||||| || || | || || | || || ||||| || || |
Sbjct 732205 ACTGCAGGATGCCCTTGCTGACCGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCGG 732146
Query 71408 CGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTAT 71467
| || || || || |||||||| | || | || |||||||||||||| || | | |
Sbjct 732145 CCGCCAGCTCGCAGCTCGCCTCCAGAGCGGCGTAGTAAATGGTTTCGAAGATGTGGATGT 732086
Query 71468 TGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTA 71527
|||| ||| || || ||||| ||||| || | | | |||||| || ||||| ||||
Sbjct 732085 TGAGCAGTTGAGCCTCTGGGCTTTCAAACGGGTGACGCATGAGAATGAAGGCGTCGGCTA 732026
Query 71528 ATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAA 71587
| || || || || || ||||| || ||||| | ||| || || | || ||||| || |
Sbjct 732025 AACCCTGGACTCCGATTCCGATCGGCCTGTGGCGCTTGTTCGAGTTCTCGGCTTCCGGTA 731966
Query 71588 TAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACAT 71647
|| || || || || || ||||| || || || ||| |||| ||||||||| |||||
Sbjct 731965 CCGGGTAGTAGTTGATCTCGATAATCTTGTTCAGGTTTTTGACGATTACTTTGGTCACAT 731906
Query 71648 CCTTTAGTTTGAGAAAATCAAATCTCCCATCT---ATTACAAACACGTTCAAGGCAACAG 71704
||||| ||||||||| ||| ||| | || ||| ||| | ||| | |
Sbjct 731905 ATGCCAGTTTCTTAAAATCAAAAGTCCGCTCTGGGGTGACGTACATGTTGAGGGCGATGG 731846
Query 71705 ATGCCAGATTACAAACGGCTACCTCAT--TAGCATCGGCATATTGTATAATTTCAGTGCA 71762
| ||||| ||||| || |||||||| | | || || |||| | |||||| |||||
Sbjct 731845 AGGCCAGGTTACAGACCGCTACCTCGTCCTTGC--TGGTGTATTCAACAATTTCGGTGCA 731788
Query 71763 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 71822
|| || || ||||| ||||| || | ||| || || || ||||| |||| || || ||
Sbjct 731787 CAGGTTGCTGCACTTTATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTC 731728
Query 71823 CTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA- 71881
|| || || || | || || ||||| || |||| || || || || || | ||| |
Sbjct 731727 TTTGTACAGCATGTATGGCGTTCCAGTCTCTGTCTGCGACTCAATGATGGCGTACCACAG 731668
Query 71882 CGACTCGAGCCTTTATTATATTCTTG---TATCTCT-TTTCTCTTTCGTATTGTGTATAT 71937
| || ||||||| | | | |||| | | || ||||| | | | ||||| |
Sbjct 731667 CTGCT-GAGCCTTCACCACACGCTTGGCCTTGCCCTCCTTCTCATAC--CTGGTGTAGAG 731611
Query 71938 AATCGTTCGAACTCGTCTCCCCAAGCA-TTGTCTAATCCAGGACATTCATTCGGACACAT 71996
|| || ||||| || |||| |||| | || | ||||| || | || ||||||||
Sbjct 731610 CTTC--TCAAACTCCTC-CCCCCAGCACTCATCCAGACCAGGGCAGGCGTTGGGACACAT 731554
Query 71997 CAATGACCACT-CTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 72055
|| ||||| | || | || | |||| ||||| || |||||||| ||||| | |
Sbjct 731553 CAGAGACCAGTCCTGGTTGCTC-TCCACTCTCTTCATGAACAGATCAGGGATCCACATGG 731495
Query 72056 C-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 72114
| || ||| || ||||||| || |||||||| |||||||| ||||| || || || |||
Sbjct 731494 CGTAGAAA-AGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGG 731436
Query 72115 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTG 72174
|| | | | ||| | ||||| || || | ||| ||||| | |||| || | |||
Sbjct 731435 AAGTCGAACACGTCAAAGTGCCAGGGCTCTAGGTACATGGCGAAGGCTCCGGGTCTCTTG 731376
Query 72175 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 72234
|| || ||||| || | ||| | || ||||| || |||||||||| ||| || | |
Sbjct 731375 TTGCCCCCCTGGTCGACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGC 731316
Query 72235 CCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATT 72294
|| ||||| || ||||| || ||||| ||||| || | | | || ||| |
Sbjct 731315 CCGTTGGAGTTTCCGTTGGTGCCAGAGATGTAGCTCCCTGTAGATCTGATGCAGCTGACC 731256
Query 72295 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 72354
| | ||| || || || || || ||||| | || || | || | ||| || |||
Sbjct 731255 GCCACACCGATGCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCGTAG 731196
Query 72355 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 72414
||||| || || || || ||| ||||| || || || ||||| |||| || | |
Sbjct 731195 ATGCCTTCAATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTG 731136
Query 72415 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 72474
| || || || || || | || || || ||||| || ||||| || || ||||| ||
Sbjct 731135 TTGGTCCCAGCGTTGAAGAGAGTCGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGG 731076
Query 72475 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATT 72534
||||| |||||||| |||| || |||||| | || |||||||| | ||| | |||
Sbjct 731075 TTGTAGGTCTCAATCGCTGCATCGATATCCGTCTTGTGGATTCCTACAGAGACTCTCATG 731016
Query 72535 AACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCC 72594
| ||| ||||| |||| || | | ||| || || |||| || ||| || |||
Sbjct 731015 AGCATGTGCTGCGGTCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTACGAACGCTCC 730956
Query 72595 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTG 72654
| ||| || || || || ||||||| || || ||||| ||||| || || ||| |||
Sbjct 730955 AGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAATCTCGGTCGTAGATTATGGACGAGTTG 730896
Query 72655 AGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATG 72713
||| || || | || ||| || || | || | ||| || || || || || |
Sbjct 730895 AGTCGGTCTTTGTTTTCTAGAACGATGTCAAGCGT-CTCCTTGGAGATCATAGGTGA--G 730839
Query 72714 TTTCCCATTTTTA--GGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGt 72771
| | | || | || || | |||||| | | ||||||||||| || || || | |
Sbjct 730838 TGGCGTTTGTTCAGGGGGTTGATGTAGTTGTACAGGTCCTCCATCACGTCGCTGAACACT 730779
Query 72772 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCT 72831
|| || || || ||||| || || || ||||| || | || || || ||||| || ||
Sbjct 730778 TTCTTAGTCTCTTTGTGCAGGTTGGAGACGGCGATCCGAGCAGCGAGGATGGCGTAGTCG 730719
Query 72832 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTT 72891
|| |||| || || ||||| || || ||||||||||| ||||| | || || ||
Sbjct 730718 GGGTGTTTAGTTGTGAGCGTGGCAGCGATCTCTGCTGCCAGCGTGTCGAGCTCCACAGTG 730659
Query 72892 GTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGA 72951
|| ||||| | || | || ||||| |||||||| | || | || || | |
Sbjct 730658 GTGACTCCGCTGTACAGACCCTGGATCACCTTCATGGTGATCTGGGCCGGGTCCACAAAG 730599
Query 72952 TCAGTGTTTAAGCCATAACATAATTTTCT-AATACGAGACGTGATTTTATCAAACATAAC 73010
|||| ||| | || || || || |||| || ||||| |||||||| || ||||| ||
Sbjct 730598 TCAGAGTTCAGCCCGTAGCA-AAGCTTCTGGATGCGAGAGGTGATTTTGTCGAACATGAC 730540
Query 73011 ATTTTCCCGGCATCCAT 73027
|||| ||| |||||
Sbjct 730539 GCGTTCCTGGCGTCCAT 730523
>seq56
Length=1093683
Score = 102 bits (112), Expect = 1e-16
Identities = 122/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820
|||| || | ||| || ||||| ||||| || || || || || || | || || || |
Sbjct 338076 CACTGAACACTTTCTTGGTTTCTTTGTGCAGGTTAGAAACTGCGATCCGTGCAGCCAGGA 338135
Query 72821 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880
| ||||| || ||||||| || || ||||| ||| | |||||||||||||||||||
Sbjct 338136 TTGCATAGTCAGGATGTTTAGTGGTGAGGGTGGCCGCTGTCTCTGCTGCCAGAGTGTCCA 338195
Query 72881 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926
|| || || || |||||| | || | || ||||| ||||||||
Sbjct 338196 GCTCCACAGTGGTGACTCCACTGTACAGACCCTGGATCACCTTCAT 338241
Score = 86.0 bits (94), Expect = 8e-12
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 71410 GCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTG 71469
|| ||||||||||| ||||| | || | || || ||||| || || |||| | |||
Sbjct 335255 GCCAGTTCACAACTGGCCTCCAGAGCGGCGTAGTAGATGGTCTCAAAGATCTGAATGTTG 335314
Query 71470 AGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 71529
|| || || || ||||| |||||||||||| | || || || || || || | |
Sbjct 335315 AGTAACTGGGCCTCTGGGCTTTCAAATGGATAACGCATAAGGATGAAGGCATCAGCCAGT 335374
Query 71530 CCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGC 71579
|| || || || || || || || ||||| | ||| |||||| |||||||
Sbjct 335375 CCCTGCACACCGATTCCAATTGGCCTGTGACGCTTGTTAGAATTTTCAGC 335424
>seq277
Length=566994
Score = 93.3 bits (102), Expect = 6e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||| ||||| || || | |||||||| || || || |||||||| ||||| | ||| |
Sbjct 257392 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 257333
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| ||||| || || | || || || ||||| ||||||||||| || || || || ||||
Sbjct 257332 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 257273
Query 42207 CAATAAGTCTCTCTCC 42222
| | || | ||||||
Sbjct 257272 CCACAACACGCTCTCC 257257
Score = 93.3 bits (102), Expect = 6e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||| ||||| || || | |||||||| || || || |||||||| ||||| | ||| |
Sbjct 272204 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 272263
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| ||||| || || | || || || ||||| ||||||||||| || || || || ||||
Sbjct 272264 TCAGCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 272323
Query 42207 CAATAAGTCTCTCTCC 42222
| | || | ||||||
Sbjct 272324 CCACAACACGCTCTCC 272339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670884049654640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |