Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq251 120 2e-22 >seq251 Length=594084 Score = 120 bits (132), Expect = 2e-22 Identities = 135/178 (76%), Gaps = 7/178 (4%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 |||||| |||||||||| || || | ||||||||||| || ||||||||||| ||||| Sbjct 587593 CATGTCTTTGTACTCTGCACCAAAGTGTCTCCACTGGAAGCCATACACCGGTCCCAGGTC 587652 Query 25833 TCCATCTTCCCTGTGCTC---AAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGC 25889 || || || | |||| |||||| || |||| ||||| | ||| || ||||| Sbjct 587653 GCCCTCCTCTC---GCTCTGTGAAGCCCAGATTGTCCAGGAAGTCCCGGGACCCGTTGGC 587709 Query 25890 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 25946 ||||||||||| ||||| ||||| || ||||| |||| || || || |||| |||| Sbjct 587710 ATCCCAGATCTTCACCCCTTTCTCTGACAGCTCCTTGGCATTAGTTGATCCCTGTGAC 587767 Score = 105 bits (116), Expect = 5e-18 Identities = 129/175 (74%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 || || |||| || || |||||||| || || || ||||||||||||||| || || Sbjct 586422 AGTCCTGTAATGTGTGCGATCATGTAGGTCAGAAGTGCGTAGCTGGCGATGTTGAAAGGA 586481 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 || || | ||||| | | || || | |||||| |||||||| || ||||| | || | Sbjct 586482 ACTCCCAGACCCATAT-CACCTGAGCGCTGGTACAGCTGACAGGACAGCTCACCATCACA 586540 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCT 25665 ||||| |||||||| | || || ||| ||||| ||||| || ||| || |||| Sbjct 586541 GACGTAGAACTGACAGAGGGCGTGGCAGGGAGGCAGAGCCATGAGGGGCAGGTCT 586595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340011520983222