Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq797 158 2e-33 seq1029 141 1e-28 seq335 95.1 2e-14 >seq797 Length=296498 Score = 158 bits (174), Expect = 2e-33 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 8741 TTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAG 8800 |||||||| ||| ||| ||||| |||||||||||||| |||||||| | |||||| Sbjct 254809 TTGACGATGTTAAAGCCCGTCTCTCCTCCGAAGGTGCTGGGCTTCCAGTACTCAGGGGAG 254868 Query 8801 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTC 8860 |||||| ||| ||| |||||||| ||||| || ||||| |||| ||| | |||||| Sbjct 254869 CAGATGGGGTTTCCCAGAAGGCCTTTCAGGGAGAAGGGAGCACCCATCTCCACCATGCTC 254928 Query 8861 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACA 8920 ||||| || ||| ||| ||||| | || |||| || || |||| ||| ||||||| | Sbjct 254929 TCACCAAATATGCTGTTAGGACGAGCTTTCTCCAGCAGGACGCCGGGGTAAAACTCCAGA 254988 Query 8921 GCCTCGATGTCTCCGTAAAG 8940 || || ||||||||||| || Sbjct 254989 GCATCTATGTCTCCGTAGAG 255008 Score = 116 bits (128), Expect = 5e-21 Identities = 174/246 (71%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 9609 TTCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATG 9668 ||| || || || ||||||| |||||||| || || || || ||| ||| ||||| Sbjct 259232 TTCACCAATGATAATGAGTCTGGTGGTCTGGAAAAGCTGCTCATCATCCCAGCTGGGATG 259291 Query 9669 TTCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACAT 9728 ||| ||||| | || || ||||||||||| ||||| ||||| || || |||||||| Sbjct 259292 TTCGACCTTCAGGATGTCACAGACTCTGTTGTGCTCCCTCAGCCATATGGTGGCGTACAT 259351 Query 9729 CATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGG 9788 |||| || |||| |||||||| |||| ||||||| ||||| ||| | | || Sbjct 259352 GGTGAGGCCCGGCAGGAGGCCAAACACCTCCTGACCGATGGCCAGGCGCTGCTCAGCTGG 259411 Query 9789 CA---CTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACAT 9845 | |||| ||| || | ||||||||| |||| || |||| || || ||||| Sbjct 259412 GAAGCCTTC---AGGGTAAACCATGTGCACAGGGACCTCAGATACCGTAGGTGGGTACAT 259468 Query 9846 TTCACC 9851 ||||| Sbjct 259469 CTCACC 259474 >seq1029 Length=384109 Score = 141 bits (156), Expect = 1e-28 Identities = 165/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 8753 AACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTC 8812 || |||||| || ||||||||||||||||||||||| | || ||||||||| |||| Sbjct 197609 AAGCCCACGGTGCCTCCGAAGGTGCTGGGTTTCCAGTACTCTGGAGAGCAGATGGCGTTT 197668 Query 8813 GCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATG 8872 |||| | ||| ||||| || || || ||||||| ||| | || |||| || |||||| Sbjct 197669 CCCATTAAGCCCTTGAGAGAGAAAGGGGCCCCCATCTCCACCATTGTCTCTCCAAAGATG 197728 Query 8873 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCT 8932 ||||||| | ||| || ||||||| || || | ||| | ||||| || ||||||| Sbjct 197729 GCGTTGGCCCTGGGTTTCTCCACCAGCAAGCCCGGGTAGAGCTCCATGGCGTCGATGTGG 197788 Query 8933 CCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTG 8975 ||||| || || || | || || ||||| || || |||| Sbjct 197789 CCGTACAGCTCCTCCAGCACTGCCGCCATTTCTTTGTCACCTG 197831 Score = 125 bits (138), Expect = 1e-23 Identities = 173/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 9613 CCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCT 9672 || || | |||||||| |||||||| || || |||||| ||| || || || | Sbjct 199296 CCAATCAGGATGAGTCTTGTGGTCTGGAAGAGCCTTTCGTCGTCCCAGTCGGGGTGAACC 199355 Query 9673 CGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATG 9732 ||||| || || ||||| | ||||||||| | ||||||||| || ||||||||||| Sbjct 199356 TCCTTCAGCACGTCACACACCCGGTTGTGTTCGCGGAGCCAGATGGTGGCGTACATCATC 199415 Query 9733 AGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACT 9792 |||||||| |||||||| || ||||| || |||||||| | || | || ||||| Sbjct 199416 AGACCAGGAACCAGGCCGAATGCCTCGTGGCCGACAGCGAAGCGTTGAGACTCTGGCACA 199475 Query 9793 TCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCG 9852 | ||||| ||| ||| | || |||||| || || | || || || ||||| || Sbjct 199476 TGAGGAGGGTAGTGCATTTCGACACCGACATCCTTTACTGTCGGTGGGTATATTTCTCCA 199535 Query 9853 TC 9854 || Sbjct 199536 TC 199537 >seq335 Length=518472 Score = 95.1 bits (104), Expect = 2e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 8751 CAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGT 8810 |||| || || | || || ||||||||||| ||||||||| | || || || || || Sbjct 120178 CAAAGCCGACTTTGCCTCCAAAGGTGCTGGGCTTCCAGTAATCTGGAGAACATATAGGGT 120119 Query 8811 TCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGA 8870 | ||| ||||||||||||||| || || || |||| ||| | ||||| || || || | Sbjct 120118 TTCCCAGGAGGCCTTTGAGGGAGAAGGGGGCGCCCATCTCCACCATGCTTTCTCCAAATA 120059 Query 8871 TGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGT 8930 |||| || || | || |||| || || || | || || || ||||| ||||| | Sbjct 120058 TGGCCCCCGGTCGTGTTTTCTCCAACATCAAGCCAGGATAAAATTCAACAGCGTCGATAT 119999 Query 8931 CTCCGTA 8937 | || || Sbjct 119998 CGCCATA 119992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708255436584160