Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq365 123 2e-23 seq1673 109 5e-19 SEQ16359 107 2e-18 seq510 89.7 5e-13 >seq365 Length=500478 Score = 123 bits (136), Expect = 2e-23 Identities = 125/163 (77%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||||||| || || | ||||| || || ||||| ||||| ||||| |||||||| Sbjct 9657 ATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCTTT 9716 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||||| |||||||| | | |||||| | | || || || | ||||| Sbjct 9717 GTCCTGGATTTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCTAGGGTGAT 9776 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTACA 95014 ||| || |||||||| ||||||||||||||||||||| || || Sbjct 9777 GGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCATGTTTGCA 9819 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || |||| |||| || | ||| | || |||||||| || | ||| || || Sbjct 8932 CCACCCCTCAGACGCAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 8991 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||||||||||| || || | ||||| || || ||||||||||| ||| Sbjct 8992 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCTGGGGGA 9051 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||||||||| | || || || || ||| ||| |||||| | | || || Sbjct 9052 ATGCCTTCTTTGTCCTGGATCTTAGCTTTCACGTTCTCGATGGTGTCACTGGGCTCAACC 9111 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | ||||||||||| ||||| || || || || ||||||||||||| Sbjct 9112 TCCAGGGTGATGGTTTTACCAGTGAGTGTCTTGACGAAGATCTGCATGC 9160 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || |||| |||| ||| | ||| | || |||||||| || | ||| || || Sbjct 3807 CCACCCCTCAGACGCAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 3866 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || || ||||||| || || ||||| || || ||| Sbjct 3867 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGA 3926 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || || |||||||| ||| |||||| | | || || Sbjct 3927 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 3986 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || ||||| || || || |||||||||||||||| Sbjct 3987 TCCAGGGTGATGGTCTTACCAGTGAGTGTCTTGACAAAGATCTGCATGC 4035 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || ||||| ||||| | ||| || || | ||| | ||| |||||||| ||||| Sbjct 4124 GTGGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTTCCA 4183 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| || || ||||| || |||||||| ||||| ||||| | || || || || Sbjct 4184 GCGAAGATCAACCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTC 4243 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | |||||| | | || || || | ||||||||||| ||||| || || Sbjct 4244 ACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTGAGTGTC 4303 Query 94991 TTCACAAAGATCTGCATGCTT 95011 || || |||||||||||| || Sbjct 4304 TTGACGAAGATCTGCATGTTT 4324 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 94874 AAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACG 94933 ||||| || || ||||| ||||| ||||| || || ||||| | |||||||||||||| Sbjct 8797 AAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATTTTTGCCTTGACA 8856 Query 94934 GCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTC 94993 | | |||||| | | || || || | |||||||| || ||||| || || || Sbjct 8857 TTCTCAATGGTGTCACTGGGCTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTG 8916 Query 94994 ACAAAGATCTGCATGC 95009 || ||||||||||||| Sbjct 8917 ACGAAGATCTGCATGC 8932 >seq1673 Length=142529 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839 |||||| | | |||| ||||| ||| | || || ||||| || | ||| || || Sbjct 267 TCCTCCACGGAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 208 Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899 || ||| | ||| |||||||| || || ||||||| | || ||||| || ||||| Sbjct 207 CAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAGG 148 Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959 || ||||||||||| | || ||||| || || | | ||||| | | || || Sbjct 147 GATGCCTTCTTTGTCTTGGATCTTTGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCAC 88 Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || ||||| || || ||||||||||||||||||| Sbjct 87 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGC 38 >SEQ16359 Length=2539 Score = 107 bits (118), Expect = 2e-18 Identities = 160/225 (71%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 94785 CTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAG 94844 |||||| |||| ||||| ||| | || || ||||| || | ||| || ||| | || Sbjct 2539 CTCTCAGACGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG--AGAG 2482 Query 94845 TGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAAT 94902 || || ||| || ||||| || || ||||||| | | |||||| || ||||| || Sbjct 2481 GGTGCGACCATCTTCTAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGAT 2422 Query 94903 ACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTC 94962 ||||||||||| | || ||||| || || ||| ||||| | | || || || Sbjct 2421 GCCTTCTTTGTCCTGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTC 2362 Query 94963 AATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| ||||| ||||| || || ||||||||||||||||| Sbjct 2361 CAGGGTGATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2317 >seq510 Length=807390 Score = 89.7 bits (98), Expect = 5e-13 Identities = 117/161 (73%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 94848 TGGAATC-CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCT 94906 |||||| || ||||| || || ||||||| | | |||||| || ||||| || ||| Sbjct 1563 TGGAATATCTANAGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCT 1622 Query 94907 TCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATC 94966 |||||||| | || ||||| || || ||| ||||| | | || || || | Sbjct 1623 TCTTTGTCCTGGATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGG 1682 Query 94967 GTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| ||||| || || ||||||||||||||||| Sbjct 1683 GTGATTGTTTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 1723 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| | | |||||| || ||||| || ||||||||||| | Sbjct 4235 AGCTGCTTACCAGCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGG 4294 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||||| || || ||| ||||| | | || || || | ||||| ||||| Sbjct 4295 ATCTTTGCTTTCACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATTGTTTTA 4354 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || ||||||||||||||||| Sbjct 4355 CCAGTCAGGGTCTTCACAAAGATCTGCAT 4383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448120770893040