Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3022 205 1e-48 seq1186 205 1e-48 seq6690 194 3e-45 seq3076 187 4e-43 seq7405 181 2e-41 seq4477 176 7e-40 seq1219 154 2e-33 seq4067 138 2e-28 seq793 116 6e-22 >seq3022 Length=51774 Score = 205 bits (226), Expect = 1e-48 Identities = 206/268 (77%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || || | | |||||| ||||||||||| |||||||| || || ||||| Sbjct 19807 CGCCAAGCGGCACCGTAAAGTTCTTCGTGATAACATCCAGGGAATCACTAAACCTGCTAT 19748 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| |||||||||||||||||| ||||||| || |||| || |||| Sbjct 19747 CCGCCGTCTGGCTCGCCGTGGTGGAGTCAAGCGTATCTCTGGTCTGATCTACGAGGAGAC 19688 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| || ||| ||||||| ||| ||| |||| |||||| || ||| ||||| Sbjct 19687 TCGCGGTGTGTTAAAGGTCTTCCTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 19628 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| || ||| |||||||| | || || || |||| | || || Sbjct 19627 GCACGCCAAGAGGAAGACGGTGACCGCCATGGATGTGGTGTACGCTCTGAAGAGGCAGGG 19568 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || || || ||| ||||| Sbjct 19567 CCGCACTCTGTACGGCTTCGGAGGTTAA 19540 >seq1186 Length=346638 Score = 205 bits (226), Expect = 1e-48 Identities = 173/213 (81%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || || | | ||||| ||||||||||| |||||||||||||||||||| Sbjct 99091 CGCCAAGCGGCACCGTAAAGTCCTTCGCGATAACATCCAGGGAATCACCAAGCCAGCTAT 99032 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| |||||||||||||| ||||| ||||||||| |||| || ||| |||| ||||||| Sbjct 99031 CCGCCGTCTGGCTCGTCGCGGTGGTGTCAAGCGTATCTCCGGTTTGATCTACGAAGAGAC 98972 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| |||||| | ||| | ||| ||| |||| |||||| || ||||||||| Sbjct 98971 TCGCGGTGTGTTGAAGGTGTTCTTGGAGAACGTCATCCGTGATGCCGTCACCTATACCGA 98912 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644 |||||| || | |||||||| ||| ||||||| Sbjct 98911 GCACGCCAAGAGGAAGACTGTGACCGCCATGGA 98879 Score = 205 bits (226), Expect = 1e-48 Identities = 173/213 (81%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || || | | ||||| ||||||||||| |||||||||||||||||||| Sbjct 113682 CGCCAAGCGGCACCGTAAAGTCCTTCGCGATAACATCCAGGGAATCACCAAGCCAGCTAT 113623 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| |||||||||||||| ||||| ||||||||| |||| || ||| |||| ||||||| Sbjct 113622 CCGCCGTCTGGCTCGTCGCGGTGGTGTCAAGCGTATCTCCGGTTTGATCTACGAAGAGAC 113563 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| |||||| | ||| | ||| ||| |||| |||||| || ||||||||| Sbjct 113562 TCGCGGTGTGTTGAAGGTGTTCTTGGAGAACGTCATCCGTGATGCCGTCACCTATACCGA 113503 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644 |||||| || | |||||||| ||| ||||||| Sbjct 113502 GCACGCCAAGAGGAAGACTGTGACCGCCATGGA 113470 >seq6690 Length=9825 Score = 194 bits (214), Expect = 3e-45 Identities = 178/225 (79%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || || | | || || |||||||| || |||||||||||||| ||||| Sbjct 161 CGCTAAGCGGCACCGTAAAGTCCTCCGTGATAACATTCAGGGAATCACCAAGCCCGCTAT 220 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| |||||||||||||||||| ||||||| || ||||||| |||| Sbjct 221 CCGCCGTCTGGCTCGCCGTGGTGGAGTCAAGCGTATCTCTGGTCTGATCTATGAGGAGAC 280 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| |||||| | ||||| ||| ||| |||| |||||| || ||| ||||| Sbjct 281 CCGCGGTGTGTTGAAGGTGTTCCTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 340 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 |||||| || | ||||| || ||| |||||||| | || || || Sbjct 341 GCACGCCAAGAGGAAGACGGTGACCGCCATGGATGTGGTGTACGC 385 >seq3076 Length=78092 Score = 187 bits (206), Expect = 4e-43 Identities = 162/201 (81%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || || | | ||| || ||||||||||| |||||||||||||||||||| Sbjct 12495 CGCCAAGCGGCACCGTAAAGTTCTCCGTGATAACATCCAGGGAATCACCAAGCCAGCTAT 12436 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||||||||| || ||||||||||||||| ||||||| || |||| || |||| Sbjct 12435 CCGTCGTCTGGCTCGCCGCGGTGGAGTCAAGCGTATCTCTGGTCTGATCTACGAGGAGAC 12376 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| |||||| | ||||| ||| ||| |||| |||||| || ||| ||||| Sbjct 12375 CCGTGGTGTGTTGAAGGTTTTCCTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 12316 Query 16612 GCACGCTAAACGTAAGACTGT 16632 |||||| || | ||||| || Sbjct 12315 GCACGCCAAGAGGAAGACGGT 12295 >seq7405 Length=12082 Score = 181 bits (200), Expect = 2e-41 Identities = 201/268 (75%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || || | | ||| || ||||||||||| |||||||| || || ||||| Sbjct 3593 CGCCAAGCGGCACCGTAAAGTTCTCCGTGATAACATCCAGGGAATCACTAAACCTGCTAT 3652 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| || ||||||||||||||| |||| || || | || || |||| Sbjct 3653 CCGCCGTCTGGCTCGCCGCGGTGGAGTCAAGCGTATCTCAGGTCTGATATACGAGGAGAC 3712 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| || ||| ||||||| ||| ||| |||| |||||| || ||| ||||| Sbjct 3713 CCGGGGTGTGTTAAAGGTCTTCCTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 3772 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| || ||| |||||||| | || || || |||| | || || Sbjct 3773 GCACGCCAAGAGGAAGACGGTGACCGCCATGGATGTGGTGTACGCTCTGAAGAGACAGGG 3832 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || || || ||| ||||| Sbjct 3833 CCGCACTCTGTACGGCTTCGGAGGTTAA 3860 >seq4477 Length=34972 Score = 176 bits (194), Expect = 7e-40 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| || || | | || |||||||||||||| ||||||||||| || || ||| Sbjct 478 GCCAAGCGGCACCGTAAAGTCCTCCGAGATAACATCCAGGGAATCACCAAACCCGCCATC 419 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||||||||| || || ||||| |||||| | || || || |||| || |||| Sbjct 418 CGTCGTCTGGCTCGCCGCGGCGGAGTGAAGCGTATTTCCGGTCTGATCTACGAGGAGACC 359 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| |||||| | ||||| | | ||| |||| |||||| || ||| |||||| Sbjct 358 CGCGGTGTGTTGAAGGTGTTCCTGGAAAACGTCATCCGTGATGCCGTCACCTACACCGAG 299 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | |||||||| ||| |||||||| | || || || |||| | || ||| Sbjct 298 CACGCCAAGAGGAAGACTGTGACCGCCATGGATGTGGTGTACGCTCTGAAGAGGCAGGGC 239 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || || || ||| ||||| Sbjct 238 CGCACTTTGTACGGCTTCGGAGGTTAA 212 >seq1219 Length=207836 Score = 154 bits (170), Expect = 2e-33 Identities = 126/153 (82%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || || | | || || ||||||||||| |||||||||||||| ||||| Sbjct 171347 CGCCAAGCGGCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 171406 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| |||||||||||||||||||||||||||||| |||| || || |||| || |||| Sbjct 171407 CCGCCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTATCTCAGGTCTGATCTACGAGGAGAC 171466 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 ||||| ||| |||||| ||||||| ||| ||| Sbjct 171467 TCGTGGTGTGTTGAAGGTCTTCCTGGAGAACGT 171499 >seq4067 Length=24591 Score = 138 bits (152), Expect = 2e-28 Identities = 136/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || ||||||||||| ||||||| || || |||||||| ||||||||| || ||| Sbjct 16155 CTCCGTGATAACATCCAGGGAATCAGTAAACCTGCTATCCGCCGTCTGGCTAACCGCGGT 16096 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 ||||| |||||| ||||||| || |||| |||||| |||| ||| |||||| | ||| Sbjct 16095 GGAGTTAAGCGTATCTCTGGTCTGATCTACAAAGAGACCCGTGGTGTGTTGAAGGTTTTC 16036 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGAC 16629 || ||| | | |||| |||||| || ||| ||||||||||| || | ||||| Sbjct 16035 CTGGAGAACATCATCCGTGATGCCGTCACCTACACCGAGCACGCCAAGAGGAAGAC 15980 >seq793 Length=308528 Score = 116 bits (128), Expect = 6e-22 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 || ||||||||||||||| ||||||| || |||| || |||| || | ||| |||||| Sbjct 303911 CGCGGTGGAGTCAAGCGTATCTCTGGTCTGATCTACGAGGAGACCCGCGGTGTGTTGAAG 303852 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 ||||| | ||| ||| |||| |||||| || ||| ||||||||||| || | ||| Sbjct 303851 GTCTTCTTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGAGCACGCCAAGAGGAAG 303792 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || || ||| |||||||| | || || || | || | || ||||| | | || || Sbjct 303791 ACAGTGACCGCCATGGATGTGGTGTACGCTCTAAAGAGGCAGGGCCGCACTCTCTACGGC 303732 Query 16688 TTTGGAAGTTAA 16699 || ||| ||||| Sbjct 303731 TTCGGAGGTTAA 303720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79047392266902