Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017-
04-25] 30,414 sequences; 991,584,656 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3022 205 1e-48
seq1186 205 1e-48
seq6690 194 3e-45
seq3076 187 4e-43
seq7405 181 2e-41
seq4477 176 7e-40
seq1219 154 2e-33
seq4067 138 2e-28
seq793 116 6e-22
>seq3022
Length=51774
Score = 205 bits (226), Expect = 1e-48
Identities = 206/268 (77%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | |||||| ||||||||||| |||||||| || || |||||
Sbjct 19807 CGCCAAGCGGCACCGTAAAGTTCTTCGTGATAACATCCAGGGAATCACTAAACCTGCTAT 19748
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| |||||||||||||||||| ||||||| || |||| || ||||
Sbjct 19747 CCGCCGTCTGGCTCGCCGTGGTGGAGTCAAGCGTATCTCTGGTCTGATCTACGAGGAGAC 19688
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | ||| || ||| ||||||| ||| ||| |||| |||||| || ||| |||||
Sbjct 19687 TCGCGGTGTGTTAAAGGTCTTCCTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 19628
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| |||||||| | || || || |||| | || ||
Sbjct 19627 GCACGCCAAGAGGAAGACGGTGACCGCCATGGATGTGGTGTACGCTCTGAAGAGGCAGGG 19568
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 19567 CCGCACTCTGTACGGCTTCGGAGGTTAA 19540
>seq1186
Length=346638
Score = 205 bits (226), Expect = 1e-48
Identities = 173/213 (81%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | ||||| ||||||||||| ||||||||||||||||||||
Sbjct 99091 CGCCAAGCGGCACCGTAAAGTCCTTCGCGATAACATCCAGGGAATCACCAAGCCAGCTAT 99032
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| |||||||||||||| ||||| ||||||||| |||| || ||| |||| |||||||
Sbjct 99031 CCGCCGTCTGGCTCGTCGCGGTGGTGTCAAGCGTATCTCCGGTTTGATCTACGAAGAGAC 98972
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | ||| |||||| | ||| | ||| ||| |||| |||||| || |||||||||
Sbjct 98971 TCGCGGTGTGTTGAAGGTGTTCTTGGAGAACGTCATCCGTGATGCCGTCACCTATACCGA 98912
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644
|||||| || | |||||||| ||| |||||||
Sbjct 98911 GCACGCCAAGAGGAAGACTGTGACCGCCATGGA 98879
Score = 205 bits (226), Expect = 1e-48
Identities = 173/213 (81%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | ||||| ||||||||||| ||||||||||||||||||||
Sbjct 113682 CGCCAAGCGGCACCGTAAAGTCCTTCGCGATAACATCCAGGGAATCACCAAGCCAGCTAT 113623
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| |||||||||||||| ||||| ||||||||| |||| || ||| |||| |||||||
Sbjct 113622 CCGCCGTCTGGCTCGTCGCGGTGGTGTCAAGCGTATCTCCGGTTTGATCTACGAAGAGAC 113563
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | ||| |||||| | ||| | ||| ||| |||| |||||| || |||||||||
Sbjct 113562 TCGCGGTGTGTTGAAGGTGTTCTTGGAGAACGTCATCCGTGATGCCGTCACCTATACCGA 113503
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644
|||||| || | |||||||| ||| |||||||
Sbjct 113502 GCACGCCAAGAGGAAGACTGTGACCGCCATGGA 113470
>seq6690
Length=9825
Score = 194 bits (214), Expect = 3e-45
Identities = 178/225 (79%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||| || || | | || || |||||||| || |||||||||||||| |||||
Sbjct 161 CGCTAAGCGGCACCGTAAAGTCCTCCGTGATAACATTCAGGGAATCACCAAGCCCGCTAT 220
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| |||||||||||||||||| ||||||| || ||||||| ||||
Sbjct 221 CCGCCGTCTGGCTCGCCGTGGTGGAGTCAAGCGTATCTCTGGTCTGATCTATGAGGAGAC 280
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| |||||| | ||||| ||| ||| |||| |||||| || ||| |||||
Sbjct 281 CCGCGGTGTGTTGAAGGTGTTCCTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 340
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656
|||||| || | ||||| || ||| |||||||| | || || ||
Sbjct 341 GCACGCCAAGAGGAAGACGGTGACCGCCATGGATGTGGTGTACGC 385
>seq3076
Length=78092
Score = 187 bits (206), Expect = 4e-43
Identities = 162/201 (81%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | ||| || ||||||||||| ||||||||||||||||||||
Sbjct 12495 CGCCAAGCGGCACCGTAAAGTTCTCCGTGATAACATCCAGGGAATCACCAAGCCAGCTAT 12436
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||||||||| || ||||||||||||||| ||||||| || |||| || ||||
Sbjct 12435 CCGTCGTCTGGCTCGCCGCGGTGGAGTCAAGCGTATCTCTGGTCTGATCTACGAGGAGAC 12376
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| |||||| | ||||| ||| ||| |||| |||||| || ||| |||||
Sbjct 12375 CCGTGGTGTGTTGAAGGTTTTCCTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 12316
Query 16612 GCACGCTAAACGTAAGACTGT 16632
|||||| || | ||||| ||
Sbjct 12315 GCACGCCAAGAGGAAGACGGT 12295
>seq7405
Length=12082
Score = 181 bits (200), Expect = 2e-41
Identities = 201/268 (75%), Gaps = 0/268 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | ||| || ||||||||||| |||||||| || || |||||
Sbjct 3593 CGCCAAGCGGCACCGTAAAGTTCTCCGTGATAACATCCAGGGAATCACTAAACCTGCTAT 3652
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || ||||||||||||||| |||| || || | || || ||||
Sbjct 3653 CCGCCGTCTGGCTCGCCGCGGTGGAGTCAAGCGTATCTCAGGTCTGATATACGAGGAGAC 3712
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| || ||| ||||||| ||| ||| |||| |||||| || ||| |||||
Sbjct 3713 CCGGGGTGTGTTAAAGGTCTTCCTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 3772
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| |||||||| | || || || |||| | || ||
Sbjct 3773 GCACGCCAAGAGGAAGACGGTGACCGCCATGGATGTGGTGTACGCTCTGAAGAGACAGGG 3832
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 3833 CCGCACTCTGTACGGCTTCGGAGGTTAA 3860
>seq4477
Length=34972
Score = 176 bits (194), Expect = 7e-40
Identities = 199/267 (75%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| || || | | || |||||||||||||| ||||||||||| || || |||
Sbjct 478 GCCAAGCGGCACCGTAAAGTCCTCCGAGATAACATCCAGGGAATCACCAAACCCGCCATC 419
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||||||||| || || ||||| |||||| | || || || |||| || ||||
Sbjct 418 CGTCGTCTGGCTCGCCGCGGCGGAGTGAAGCGTATTTCCGGTCTGATCTACGAGGAGACC 359
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| |||||| | ||||| | | ||| |||| |||||| || ||| ||||||
Sbjct 358 CGCGGTGTGTTGAAGGTGTTCCTGGAAAACGTCATCCGTGATGCCGTCACCTACACCGAG 299
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || | |||||||| ||| |||||||| | || || || |||| | || |||
Sbjct 298 CACGCCAAGAGGAAGACTGTGACCGCCATGGATGTGGTGTACGCTCTGAAGAGGCAGGGC 239
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | || || || ||| |||||
Sbjct 238 CGCACTTTGTACGGCTTCGGAGGTTAA 212
>seq1219
Length=207836
Score = 154 bits (170), Expect = 2e-33
Identities = 126/153 (82%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | || || ||||||||||| |||||||||||||| |||||
Sbjct 171347 CGCCAAGCGGCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 171406
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| |||||||||||||||||||||||||||||| |||| || || |||| || ||||
Sbjct 171407 CCGCCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTATCTCAGGTCTGATCTACGAGGAGAC 171466
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584
||||| ||| |||||| ||||||| ||| |||
Sbjct 171467 TCGTGGTGTGTTGAAGGTCTTCCTGGAGAACGT 171499
>seq4067
Length=24591
Score = 138 bits (152), Expect = 2e-28
Identities = 136/176 (77%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
|| || ||||||||||| ||||||| || || |||||||| ||||||||| || |||
Sbjct 16155 CTCCGTGATAACATCCAGGGAATCAGTAAACCTGCTATCCGCCGTCTGGCTAACCGCGGT 16096
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573
||||| |||||| ||||||| || |||| |||||| |||| ||| |||||| | |||
Sbjct 16095 GGAGTTAAGCGTATCTCTGGTCTGATCTACAAAGAGACCCGTGGTGTGTTGAAGGTTTTC 16036
Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGAC 16629
|| ||| | | |||| |||||| || ||| ||||||||||| || | |||||
Sbjct 16035 CTGGAGAACATCATCCGTGATGCCGTCACCTACACCGAGCACGCCAAGAGGAAGAC 15980
>seq793
Length=308528
Score = 116 bits (128), Expect = 6e-22
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
|| ||||||||||||||| ||||||| || |||| || |||| || | ||| ||||||
Sbjct 303911 CGCGGTGGAGTCAAGCGTATCTCTGGTCTGATCTACGAGGAGACCCGCGGTGTGTTGAAG 303852
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
||||| | ||| ||| |||| |||||| || ||| ||||||||||| || | |||
Sbjct 303851 GTCTTCTTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGAGCACGCCAAGAGGAAG 303792
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| || ||| |||||||| | || || || | || | || ||||| | | || ||
Sbjct 303791 ACAGTGACCGCCATGGATGTGGTGTACGCTCTAAAGAGGCAGGGCCGCACTCTCTACGGC 303732
Query 16688 TTTGGAAGTTAA 16699
|| ||| |||||
Sbjct 303731 TTCGGAGGTTAA 303720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79047392266902
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |